RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 SMYD3Q9H7B4 428 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 XPO7Q9UIA9 1087 aaKnown RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 LRRC37AA6NMS7 1700 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 E7ENQ6 273 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 H0YIN7 160 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 ZWINTO95229 277 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 CST3P01034 146 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 SKIP12755 728 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 GMPRP36959 345 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 CDK16Q00536 496 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 CUL2Q13617 745 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 MORF4L2Q15014 288 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 PLEKHA7Q6IQ23 1121 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 TDRPQ86YL5 185 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 POU5F2Q8N7G0 328 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 ZNF606Q8WXB4 792 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 SKA1Q96BD8 255 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 OXNAD1Q96HP4 312 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-202ENST00000524773 TTC25Q96NG3 672 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 C20orf27Q9GZN8 174 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 PACSIN3Q9UKS6 424 aa13.8□□□□□ -0.2
CAPN1-202ENST00000524773 E2F8A0AVK6 867 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 TTLL13PA6NNM8 815 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 ATP2A1O14983 1001 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 MAP3K7O43318 606 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 LIG4P49917 911 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 IRGCQ6NXR0 463 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 KIAA0319LQ8IZA0 1049 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 PYDC1Q8WXC3 89 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 PANX3Q96QZ0 392 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 EXOC7Q9UPT5 735 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 TMX2Q9Y320 296 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 CXorf49A8MYA2 514 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-202ENST00000524773 KBTBD13C9JR72 458 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 EDN1P05305 212 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 POTEJP0CG39 1038 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 CDKN2BP42772 138 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 MMRN1Q13201 1228 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 MTERF2Q49AM1 385 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 SWSAP1Q6NVH7 229 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 DNAJC24Q6P3W2 148 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 RIPOR1Q6ZS17 1223 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
CAPN1-202ENST00000524773 RCOR2Q8IZ40 523 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 GALNT15Q8N3T1 639 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 JOSD2Q8TAC2 188 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 HSPH1Q92598 858 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 EBF4Q9BQW3 602 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 VCXQ9H320 206 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 SYNCQ9H7C4 482 aa13.79□□□□□ -0.2
CAPN1-202ENST00000524773 MRPL47Q9HD33 250 aaKnown RBP13.79□□□□□ -0.2
CAPN1-202ENST00000524773 SEPT9Q9UHD8 586 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-202ENST00000524773 TMEM191CA6NGB0 347 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 TMEM191BP0C7N4 346 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 RFC1P35251 1148 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-202ENST00000524773 RPS6P62753 249 aaKnown RBP13.78□□□□□ -0.2
CAPN1-202ENST00000524773 ROR2Q01974 943 aaKnown RBP13.78□□□□□ -0.2
CAPN1-202ENST00000524773 LBRQ14739 615 aaKnown RBP13.78□□□□□ -0.2
CAPN1-202ENST00000524773 CFAP157Q5JU67 520 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 RASIP1Q5U651 963 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 ADGRD1Q6QNK2 874 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 RAPH1Q70E73 1250 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 DPH6Q7L8W6 267 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 PPM1NQ8N819 430 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 RSAD2Q8WXG1 361 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 CCDC124Q96CT7 223 aaKnown RBP13.78□□□□□ -0.2
CAPN1-202ENST00000524773 EHMT1Q9H9B1 1298 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 SAR1AQ9NR31 198 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 PARVAQ9NVD7 372 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 LTBP1Q14766 1721 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 ZNF536O15090 1300 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 TCRBV9S1A1TA0A576 114 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 TRAF1Q13077 416 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 TFDP3Q5H9I0 405 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 ATP11CQ8NB49 1132 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 GSTCDQ8NEC7 633 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 CHURC1Q8WUH1 139 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 CLEC4DQ8WXI8 215 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 IFT43Q96FT9 208 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 WNK4Q96J92 1243 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 FAM81BQ96LP2 452 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 GBP5Q96PP8 586 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 ZNF184Q99676 751 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-202ENST00000524773 TARS2Q9BW92 718 aaKnown RBP13.78□□□□□ -0.2
CAPN1-202ENST00000524773 SLC24A2Q9UI40 661 aa13.78□□□□□ -0.2
CAPN1-202ENST00000524773 G3BP2Q9UN86 482 aaKnown RBP13.78□□□□□ -0.2
CAPN1-202ENST00000524773 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-202ENST00000524773 MYH9P35579 1960 aaKnown RBP13.78□□□□□ -0.2
CAPN1-202ENST00000524773 RAD17O75943 681 aa13.77□□□□□ -0.2
CAPN1-202ENST00000524773 C4BPAP04003 597 aaKnown RBP13.77□□□□□ -0.2
CAPN1-202ENST00000524773 PYGLP06737 847 aa13.77□□□□□ -0.2
CAPN1-202ENST00000524773 F7P08709 466 aaPredicted RBP13.77□□□□□ -0.2
CAPN1-202ENST00000524773 RARBP10826 455 aa13.77□□□□□ -0.2
CAPN1-202ENST00000524773 ZACNQ401N2 412 aa13.77□□□□□ -0.2
CAPN1-202ENST00000524773 LPCAT4Q643R3 524 aa13.77□□□□□ -0.2
CAPN1-202ENST00000524773 ZBTB33Q86T24 672 aa13.77□□□□□ -0.2
CAPN1-202ENST00000524773 ARFGAP1Q8N6T3 406 aa13.77□□□□□ -0.2
CAPN1-202ENST00000524773 PPFIBP2Q8ND30 876 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms