RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 TIMM13Q9Y5L4 95 aaPredicted RBP21.9■■□□□ 1.1
SQLE-206ENST00000523430 TDRD15B5MCY1 1934 aaKnown RBP21.9■■□□□ 1.1
SQLE-206ENST00000523430 GABRDO14764 452 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 RPL9P32969 192 aaKnown RBP21.9■■□□□ 1.1
SQLE-206ENST00000523430 CDR1P51861 262 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 BCAT1P54687 386 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 BST2Q10589 180 aaKnown RBP21.9■■□□□ 1.1
SQLE-206ENST00000523430 TTC27Q6P3X3 843 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 OLFML1Q6UWY5 402 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 TRIM51Q9BSJ1 452 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 C9IYK1 514 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 I3L4J1 428 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 LRCH4O75427 683 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 KRT1P04264 644 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 RALAP11233 206 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 TNNT3P45378 269 aaPredicted RBP21.89■■□□□ 1.09
SQLE-206ENST00000523430 AARSP49588 968 aaKnown RBP eCLIP21.89■■□□□ 1.09
SQLE-206ENST00000523430 DR1Q01658 176 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 DSTYKQ6XUX3 929 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 ANKRD52Q8NB46 1076 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 EXD1Q8NHP7 514 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 CCDC26Q8TAB7 109 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 IFT81Q8WYA0 676 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 UBN1Q9NPG3 1134 aa21.89■■□□□ 1.09
SQLE-206ENST00000523430 DDX43Q9NXZ2 648 aaKnown RBP21.89■■□□□ 1.09
SQLE-206ENST00000523430 PI4K2BG5E9Z4 385 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 FSCN2O14926 492 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 GRAP2O75791 330 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 SELPP16109 830 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 SLC25A11Q02978 314 aaKnown RBP21.88■■□□□ 1.09
SQLE-206ENST00000523430 CYP1B1Q16678 543 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 TIGD5Q53EQ6 642 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 TMEM110Q86TL2 294 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 HASPINQ8TF76 798 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 MAGOHBQ96A72 148 aaKnown RBP21.88■■□□□ 1.09
SQLE-206ENST00000523430 RNF25Q96BH1 459 aaPredicted RBP21.88■■□□□ 1.09
SQLE-206ENST00000523430 BEGAINQ9BUH8 593 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 B3GNT5Q9BYG0 378 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 MTUS1Q9ULD2 1270 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 NFU1Q9UMS0 254 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.88■■□□□ 1.09
SQLE-206ENST00000523430 BHMG1C9JSJ3 638 aaPredicted RBP21.88■■□□□ 1.09
SQLE-206ENST00000523430 MAP2K7O14733 419 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 PAPSS1O43252 624 aaPredicted RBP21.88■■□□□ 1.09
SQLE-206ENST00000523430 ATP8B1O43520 1251 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 TUSC3Q13454 348 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 CASP8Q14790 479 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 TAF5Q15542 800 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 LRRC38Q5VT99 294 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 HDXQ7Z353 690 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 MAATS1Q7Z4T9 603 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 FUKQ8N0W3 1084 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 HEMGNQ9BXL5 484 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 MIS12Q9H081 205 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.88■■□□□ 1.09
SQLE-206ENST00000523430 FAM53CQ9NYF3 392 aa21.88■■□□□ 1.09
SQLE-206ENST00000523430 CLDN5O00501 218 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 RRP9O43818 475 aaKnown RBP21.87■■□□□ 1.09
SQLE-206ENST00000523430 NBNO60934 754 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 CCL5P13501 91 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 PTPN1P18031 435 aaKnown RBP21.87■■□□□ 1.09
SQLE-206ENST00000523430 IL1R2P27930 398 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 CHRNA3P32297 505 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 FLT3P36888 993 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 SMC1AQ14683 1233 aaKnown RBP21.87■■□□□ 1.09
SQLE-206ENST00000523430 PPP2R5EQ16537 467 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 MDH1BQ5I0G3 518 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 CLLU1OSQ5K130 101 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 ZFYVE27Q5T4F4 411 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 CD300LGQ6UXG3 332 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 SLC24A5Q71RS6 500 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 SCUBE3Q8IX30 993 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 STK32AQ8WU08 396 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 SLITRK1Q96PX8 696 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 DNAI2Q9GZS0 605 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 RNF208Q9H0X6 261 aa21.87■■□□□ 1.09
SQLE-206ENST00000523430 C2CD4BA6NLJ0 364 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 F8W810 466 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 INPPL1O15357 1258 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 B4GALT3O60512 393 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 B3GAT3O94766 335 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 GPD1P21695 349 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 BRCC3P46736 316 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 KLF1Q13351 362 aaPredicted RBP21.86■■□□□ 1.09
SQLE-206ENST00000523430 GPNMBQ14956 572 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 SMTNL2Q2TAL5 461 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 DDX42Q86XP3 938 aaKnown RBP eCLIP21.86■■□□□ 1.09
SQLE-206ENST00000523430 TMEM86AQ8N2M4 240 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 C12orf50Q8NA57 414 aaPredicted RBP21.86■■□□□ 1.09
SQLE-206ENST00000523430 CLEC4CQ8WTT0 213 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 C1orf54Q8WWF1 131 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 ZWILCHQ9H900 591 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 CRTAC1Q9NQ79 661 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 PQBP1O60828 265 aaKnown RBP21.86■■□□□ 1.09
SQLE-206ENST00000523430 FAM163BP0C2L3 166 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 ECHS1P30084 290 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 PTGIRP43119 386 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 ZNF143P52747 638 aaPredicted RBP21.86■■□□□ 1.09
SQLE-206ENST00000523430 EPHB4P54760 987 aa21.86■■□□□ 1.09
SQLE-206ENST00000523430 DHX34Q14147 1143 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms