RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ZNF284Q2VY69 593 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 CPB2Q96IY4 423 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 PRPF18Q99633 342 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 CYP4F11Q9HBI6 524 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 LRRIQ3A6PVS8 624 aaPredicted RBP16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 OVOS1Q6IE37 1185 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 CBWD1Q9BRT8 395 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 APOL5Q9BWW9 433 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 VIPAS39Q9H9C1 493 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 RIC8BQ9NVN3 520 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 THG1LQ9NWX6 298 aaKnown RBP16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 SYNPO2Q9UMS6 1093 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 PRR23AA6NEV1 266 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 ATMINO43313 823 aaPredicted RBP16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 PSTPIP1O43586 416 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 EFEMP1Q12805 493 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 PPIL2Q13356 520 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 E4F1Q66K89 784 aaPredicted RBP16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 LRRC8EQ6NSJ5 796 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 ANKS1AQ92625 1134 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 KAZALD1Q96I82 304 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 VPS28Q9UK41 221 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 PCDHB5Q9Y5E4 795 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 GOLGA8RI6L899 631 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 MEFVO15553 781 aaPredicted RBP16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 PPIL6Q8IXY8 311 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 DNAJB3Q8WWF6 145 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 CDV3Q9UKY7 258 aaKnown RBP16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 GEMIN4P57678 1058 aaKnown RBP16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 VSNL1P62760 191 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 OCA2Q04671 838 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 STARD3Q14849 445 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 ZNF720Q7Z2F6 126 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 SLFN11Q7Z7L1 901 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 ZNF410Q86VK4 478 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 JAMLQ86YT9 394 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 TRIM51Q9BSJ1 452 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 TAF6LQ9Y6J9 622 aa16.89■□□□□ 0.29
PCDHA3-201ENST00000522353 SOAT2O75908 522 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 RHOCP08134 193 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 ACVR2BQ13705 512 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 FSCN1Q16658 493 aaKnown RBP16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 LY6KQ17RY6 165 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 SLC27A1Q6PCB7 646 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 UNC45BQ8IWX7 931 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 CARNMT1Q8N4J0 409 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 STAMBPL1Q96FJ0 436 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 FBXO44Q9H4M3 255 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 TLR8Q9NR97 1041 aaKnown RBP16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 H2AFYO75367 372 aaKnown RBP16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 DNAJB2P25686 324 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 MED21Q13503 144 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 CCNJLQ8IV13 435 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 TRMT6Q9UJA5 497 aaKnown RBP16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 PPP1R3GB7ZBB8 358 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 MAPTP10636 758 aaKnown RBP16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 GHRP10912 638 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 PTK7Q13308 1070 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 C3orf62Q6ZUJ4 267 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 RPAINQ86UA6 219 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 HOMEZQ8IX15 550 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 SGSM3Q96HU1 749 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 CIPCQ9C0C6 399 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 CARD9Q9H257 536 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 LSM8O95777 96 aaKnown RBP16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 MYL4P12829 197 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 PSEN2P49810 448 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 BLOC1S5Q8TDH9 187 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 ECT2Q9H8V3 914 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 NMRK1Q9NWW6 199 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 GRID1Q9ULK0 1009 aa16.88■□□□□ 0.29
PCDHA3-201ENST00000522353 CASTOR2A6NHX0 329 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 MYO1CO00159 1063 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 MAP3K13O43283 966 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 XYLBO75191 536 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 HPCAP84074 193 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 BST2Q10589 180 aaKnown RBP16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 SPATA21Q7Z572 469 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 FAM71DQ8N9W8 422 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 SYT15Q9BQS2 421 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 SPACA6W5XKT8 324 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 ARIH2O95376 493 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 KLRC2P26717 231 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 CCZ1BP86790 482 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 CCZ1P86791 482 aaPredicted RBP16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 CYP24A1Q07973 514 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 FAM83EQ2M2I3 478 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 PREPLQ4J6C6 727 aaPredicted RBP16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 TMEM176AQ96HP8 235 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 FHDC1Q9C0D6 1143 aaPredicted RBP16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 ASB7Q9H672 318 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 PCMTD2Q9NV79 361 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 ARL2BPQ9Y2Y0 163 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 POLR1AO95602 1720 aaPredicted RBP16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 FOXN3O00409 490 aaPredicted RBP16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 MAGEA4P43358 317 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 PTPN11Q06124 597 aaPredicted RBP16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 CUL3Q13618 768 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 HASPINQ8TF76 798 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 APOA4P06727 396 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms