RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TDRD10Q5VZ19 366 aaKnown RBP22.11■■□□□ 1.13
SDCBP-209ENST00000522243 MYCBPAPQ8TBZ2 947 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 SLC22A12Q96S37 553 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 CYP2S1Q96SQ9 504 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 HINFPQ9BQA5 517 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 FAM83CQ9BQN1 747 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 XYLT2Q9H1B5 865 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 KCTD10Q9H3F6 313 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 DPEP3Q9H4B8 488 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 EBF3Q9H4W6 596 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 DMAC2Q9NW81 257 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 ZSCAN32Q9NX65 697 aa22.11■■□□□ 1.13
SDCBP-209ENST00000522243 SATB1Q01826 763 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 ITPRIPL2Q3MIP1 535 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 C1orf228Q6PIY5 440 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 VSTM1Q6UX27 236 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 DCLK2Q8N568 766 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 FSIP1Q8NA03 581 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 SUMF1Q8NBK3 374 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 ZBTB44Q8NCP5 570 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 PARD3BQ8TEW8 1205 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 SYAP1Q96A49 352 aaPredicted RBP22.1■■□□□ 1.13
SDCBP-209ENST00000522243 KIF9Q9HAQ2 790 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 GDPD2Q9HCC8 539 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 HPS4Q9NQG7 708 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 PCDHGA2Q9Y5H1 932 aa22.1■■□□□ 1.13
SDCBP-209ENST00000522243 A8MXQ7 604 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 STAU1O95793 577 aaKnown RBP22.09■■□□□ 1.13
SDCBP-209ENST00000522243 C4BPAP04003 597 aaKnown RBP22.09■■□□□ 1.13
SDCBP-209ENST00000522243 NR3C1P04150 777 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 ARSAP15289 507 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 PTPN1P18031 435 aaKnown RBP22.09■■□□□ 1.13
SDCBP-209ENST00000522243 ANXA13P27216 316 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 ATICP31939 592 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 CDH8P55286 799 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 USP46P62068 366 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 DLG4P78352 724 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 RUNX3Q13761 415 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 LRRC32Q14392 662 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 CEP135Q66GS9 1140 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 CC2D1AQ6P1N0 951 aaPredicted RBP22.09■■□□□ 1.13
SDCBP-209ENST00000522243 Q6ZS52 159 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 ARL14EPQ8N8R7 260 aaPredicted RBP22.09■■□□□ 1.13
SDCBP-209ENST00000522243 NELL1Q92832 810 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 SMYD3Q9H7B4 428 aa22.09■■□□□ 1.13
SDCBP-209ENST00000522243 TRAV19A0A0A6YYK7 116 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 C2orf78A6NCI8 922 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 OTOL1A6NHN0 477 aaPredicted RBP22.08■■□□□ 1.13
SDCBP-209ENST00000522243 SOBPA7XYQ1 873 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 PDXKO00764 312 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 CKMP06732 381 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 RAP1GAPP47736 663 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 CXCL12P48061 93 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 CCR3P51677 355 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 ZNF699Q32M78 642 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 SCARA5Q6ZMJ2 495 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 DENND5BQ6ZUT9 1274 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 SLC9A9Q8IVB4 645 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 SPATA17Q96L03 361 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 IER2Q9BTL4 223 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 GOLPH3LQ9H4A5 285 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 MAPK8IP1Q9UQF2 711 aa22.08■■□□□ 1.13
SDCBP-209ENST00000522243 MYO15AQ9UKN7 3530 aa22.08■■□□□ 1.12
SDCBP-209ENST00000522243 FAM237AA0A1B0GTK4 181 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 F8VP50 259 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 CLDN5O00501 218 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 LILRB5O75023 590 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 MYL1P05976 194 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 FAM163BP0C2L3 166 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 USP17L7P0C7H9 530 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 TDGF1P13385 188 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 CACNA2D1P54289 1103 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 FAM160A1Q05DH4 1040 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 NCOA4Q13772 614 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 ZNF268Q14587 947 aaPredicted RBP22.07■■□□□ 1.12
SDCBP-209ENST00000522243 MTF1Q14872 753 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 ZNF667Q5HYK9 610 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 DGKKQ5KSL6 1271 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 MAMSTRQ6ZN01 415 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 KRBA2Q6ZNG9 492 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 CCDC47Q96A33 483 aaKnown RBP22.07■■□□□ 1.12
SDCBP-209ENST00000522243 ZNF518BQ9C0D4 1074 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 SCAND2PQ9GZW5 306 aaPredicted RBP22.07■■□□□ 1.12
SDCBP-209ENST00000522243 GCNT4Q9P109 453 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 ATP6V1DQ9Y5K8 247 aa22.07■■□□□ 1.12
SDCBP-209ENST00000522243 PTPRZ1P23471 2315 aaPredicted RBP22.06■■□□□ 1.12
SDCBP-209ENST00000522243 TRIM66O15016 1216 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 VNN1O95497 513 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 AP3M2P53677 418 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 CLDN10P78369 228 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 DPYDQ12882 1025 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 IFRD2Q12894 506 aaPredicted RBP22.06■■□□□ 1.12
SDCBP-209ENST00000522243 PPP2R5DQ14738 602 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 KIAA2013Q8IYS2 634 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 SPEM1Q8N4L4 309 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 B3GALNT2Q8NCR0 500 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 RUBCNQ92622 972 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 B3GNT5Q9BYG0 378 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 SDCBP2Q9H190 292 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 TMEM30AQ9NV96 361 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms