RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ALDH1A3P47895 512 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 AMPD2Q01433 879 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 PLD1Q13393 1074 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 ARHGAP15Q53QZ3 475 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 EMC10Q5UCC4 262 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 TTC30AQ86WT1 665 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 MAB21L3Q8N8X9 362 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 FAM20AQ96MK3 541 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 FCRL3Q96P31 734 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 SLKQ9H2G2 1235 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 LINC00597Q9H2U6 94 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 DNMT3LQ9UJW3 386 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 DOPEY1Q5JWR5 2465 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 COL5A1P20908 1838 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 MUC22E2RYF6 1773 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 M0QZQ0 153 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 F11P03951 625 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 KCNE1P15382 129 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 TIMP2P16035 220 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 RPL9P32969 192 aaKnown RBP9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 RCAN1P53805 252 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 ZNF33AQ06730 810 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 PDGFRLQ15198 375 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 INF2Q27J81 1249 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 EML3Q32P44 896 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 ADCK5Q3MIX3 580 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 TXNDC8Q6A555 127 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 ALLCQ8N6M5 410 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 FAM181AQ8N9Y4 354 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 IL17RCQ8NAC3 791 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 APPL2Q8NEU8 664 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 PIGOQ8TEQ8 1089 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 IL21RQ9HBE5 538 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 PTPRHQ9HD43 1115 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 ZDHHC4Q9NPG8 344 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 ANKEF1Q9NU02 776 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 TDP1Q9NUW8 608 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 NUB1Q9Y5A7 615 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 WNT6Q9Y6F9 365 aa9.67□□□□□ -0.86
TRAPPC9-212ENST00000521944 ZNF638Q14966 1978 aaKnown RBP9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 WISP1O95388 367 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 FGF19O95750 216 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 HMGA1P17096 107 aaKnown RBP9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 MCM4P33991 863 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 DPP6P42658 865 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 OSTNP61366 133 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 SMAD1Q15797 465 aaKnown RBP9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 DCAF4L1Q3SXM0 396 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 NCAPH2Q6IBW4 605 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 DBX2Q6ZNG2 339 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 DHX32Q7L7V1 743 aaKnown RBP9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 FMNL3Q8IVF7 1028 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 TXNDC5Q8NBS9 432 aaKnown RBP9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 WHAMMQ8TF30 809 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 OSCP1Q8WVF1 389 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 HMGB4Q8WW32 186 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 SLC22A12Q96S37 553 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 EIF2AK1Q9BQI3 630 aaKnown RBP9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 ADPGKQ9BRR6 497 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 KIFC3Q9BVG8 833 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 ATP13A2Q9NQ11 1180 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 PCDHA4Q9UN74 947 aa9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 TLN1Q9Y490 2541 aaKnown RBP9.66□□□□□ -0.86
TRAPPC9-212ENST00000521944 MYOFQ9NZM1 2061 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 TEX51A0A1B0GUA7 166 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 A0A1W2PQD8 194 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 ABLIM1O14639 778 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 CAPN9O14815 690 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 USO1O60763 962 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 KLF8O95600 359 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 SYPP08247 313 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 LIG1P18858 919 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 CDC25CP30307 473 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 AVPR1AP37288 418 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 ABL2P42684 1182 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 KIR2DL1P43626 348 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 AARSP49588 968 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 NLRP12P59046 1061 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 NLRP5P59047 1200 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 BNC1Q01954 994 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 RPL6Q02878 288 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 YWHAHQ04917 246 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 SCRN1Q12765 414 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 MYO1EQ12965 1108 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 GRIK2Q13002 908 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 MTF1Q14872 753 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 ZNF77Q15935 545 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 INTS6LQ5JSJ4 861 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 COLEC12Q5KU26 742 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 ATF7IP2Q5U623 682 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 RNF20Q5VTR2 975 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 ZNF787Q6DD87 383 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 PPP4R3AQ6IN85 833 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 ITIH5Q86UX2 942 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 EFCAB13Q8IY85 973 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 CPA6Q8N4T0 437 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 CCDC148Q8NFR7 591 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 OR10T2Q8NGX3 314 aa9.65□□□□□ -0.86
TRAPPC9-212ENST00000521944 GIPC2Q8TF65 315 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms