RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 HAPLN2Q9GZV7 340 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 NUCKS1Q9H1E3 243 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 FBXO44Q9H4M3 255 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 MIOSQ9NXC5 875 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 GCNT4Q9P109 453 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 RSPH14Q9UHP6 348 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 FBXL5Q9UKA1 691 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 FBXW11Q9UKB1 542 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 RAB21Q9UL25 225 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 BARX2Q9UMQ3 279 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 POLIQ9UNA4 740 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 RRP15Q9Y3B9 282 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 NFE2L3Q9Y4A8 694 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 MRFAP1Q9Y605 127 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 RANBP2P49792 3224 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 CCDC195A0A1B0GUA6 201 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 HIDE1A8MVS5 230 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 RFXAPO00287 272 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 DPYSL4O14531 572 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 URI1O94763 535 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 SEC31AO94979 1220 aaKnown RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 CPP00450 1065 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 C4BPAP04003 597 aaKnown RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 PAEPP09466 180 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 LINC00271P0C7V0 271 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 FAM200BP0CF97 657 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 ALADP13716 330 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 HOXD13P35453 343 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 MAGEA9P43362 315 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 TNNT3P45378 269 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 BRCC3P46736 316 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 STX17P56962 302 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 MYL6P60660 151 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 CYP27A1Q02318 531 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 KCNC4Q03721 635 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 SOX4Q06945 474 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 ADCY1Q08828 1119 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 KCNH2Q12809 1159 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 TBX2Q13207 712 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 MTA1Q13330 715 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 MRPL58Q14197 206 aaKnown RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 ADGRE1Q14246 886 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 COL19A1Q14993 1142 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 E2F5Q15329 346 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 MEA1Q16626 185 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 CTC1Q2NKJ3 1217 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 DPCR1Q3MIW9 517 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 PREPLQ4J6C6 727 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 VWA3BQ502W6 1294 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 TCP11X2Q5H9J9 407 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 RARS2Q5T160 578 aaKnown RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 WSCD1Q658N2 575 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 TREML4Q6UXN2 200 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 GPR149Q86SP6 731 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 DDX42Q86XP3 938 aaKnown RBP eCLIP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 PALB2Q86YC2 1186 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 TMEM139Q8IV31 216 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 TRIM59Q8IWR1 403 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 PPM1KQ8N3J5 372 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 B3GALNT2Q8NCR0 500 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 GLIS3Q8NEA6 775 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 CCDC26Q8TAB7 109 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 MYCBPAPQ8TBZ2 947 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 OVCA2Q8WZ82 227 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 MRPS31Q92665 395 aaKnown RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 SLC35C1Q96A29 364 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 SPAG5Q96R06 1193 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 TUBGCP2Q9BSJ2 902 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 PHF7Q9BWX1 381 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 FGFBP2Q9BYJ0 223 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 NACA2Q9H009 215 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 ZCWPW1Q9H0M4 648 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 NDST4Q9H3R1 872 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 SLITRK6Q9H5Y7 841 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 PNPLA8Q9NP80 782 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 DMAP1Q9NPF5 467 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 THG1LQ9NWX6 298 aaKnown RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 ABI2Q9NYB9 513 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 GDE1Q9NZC3 331 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 ADAM21Q9UKJ8 722 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 COQ4Q9Y3A0 265 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 INSL5Q9Y5Q6 135 aa5.98□□□□□ -1.45
CTNNA1-220ENST00000520260 PTPRSQ13332 1948 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 ANKRD62A6NC57 917 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 TRIM49BA6NDI0 452 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 EPOPA6NHQ4 379 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 GABRDO14764 452 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 PER2O15055 1255 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 FANCGO15287 622 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 ERLIN1O75477 346 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 ABLIM3O94929 683 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 ARHGEF15O94989 841 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 TRIM49P0CI25 452 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 TRIM49CP0CI26 452 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 SETSIPP0DME0 302 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 KRT5P13647 590 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 FSHRP23945 695 aa5.97□□□□□ -1.45
CTNNA1-220ENST00000520260 DNAJB1P25685 340 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms