RNA–Protein interactions for RNA: ENST00000520109.1

TNFRSF10B-206, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 674 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-206ENST00000520109 ZFYVE19Q96K21 471 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TNIP3Q96KP6 325 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 FAM83CQ9BQN1 747 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SCAND2PQ9GZW5 306 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 FRMD4BQ9Y2L6 1034 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 NCANO14594 1321 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 COL4A2P08572 1712 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 FOXD2O60548 495 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SOX9P48436 509 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 IFNAR2P48551 515 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 GPR15P49685 360 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CDR1P51861 262 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 MTF1Q14872 753 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 PON2Q15165 354 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TSSK4Q6SA08 328 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TMEM150AQ86TG1 271 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 OSTM1Q86WC4 334 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 GPIHBP1Q8IV16 184 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SLC9A9Q8IVB4 645 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 KIAA2013Q8IYS2 634 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 KIAA1958Q8N8K9 716 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SLITRK1Q96PX8 696 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 PTPRJQ12913 1337 aa20.46■□□□□ 0.87
TNFRSF10B-206ENST00000520109 A8MXQ7 604 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PDXKO00764 312 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 CALUO43852 315 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PDGFRBP09619 1106 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 DRD1P21728 446 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 BDNFP23560 247 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PSMC1P62191 440 aaKnown RBP20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 CCINQ13939 588 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 ZNF667Q5HYK9 610 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 TDRD10Q5VZ19 366 aaKnown RBP20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 LAIR1Q6GTX8 287 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 LONP2Q86WA8 852 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PAGE5Q96GU1 130 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PCED1BQ96HM7 432 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 C8orf48Q96LL4 319 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 SMG9Q9H0W8 520 aaKnown RBP20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 VRTNQ9H8Y1 702 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 DUS2Q9NX74 493 aaKnown RBP20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 SERTAD1Q9UHV2 236 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 COL4A3Q01955 1670 aa20.45■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PRR5-ARHGAP8B1AHC4 643 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 RPN1P04843 607 aaKnown RBP20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 TCF3P15923 654 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 HDCP19113 662 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 LMO2P25791 158 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 HOXA6P31267 233 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 SYKP43405 635 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 NOP14P78316 857 aaKnown RBP20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 ARHGAP8P85298 464 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 LMNB2Q03252 620 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 TNK2Q07912 1038 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PUM1Q14671 1186 aaKnown RBP eCLIP20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 ZNF699Q32M78 642 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 SDHAF4Q5VUM1 108 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 DDX42Q86XP3 938 aaKnown RBP eCLIP20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 SPRYD3Q8NCJ5 442 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 STKLD1Q8NE28 680 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PDZD8Q8NEN9 1154 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 TTC8Q8TAM2 541 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 OSCP1Q8WVF1 389 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 TAF4BQ92750 862 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 LRRC3BQ96PB8 259 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 IMPG2Q9BZV3 1241 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 EBF3Q9H4W6 596 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 NXF1Q9UBU9 619 aaKnown RBP20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 FANCMQ8IYD8 2048 aa20.44■□□□□ 0.86
TNFRSF10B-206ENST00000520109 MYO15AQ9UKN7 3530 aa20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 TRDMT1O14717 391 aaKnown RBP20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 SLC9A3R1O14745 358 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 LRP3O75074 770 aa20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 RTN3O95197 1032 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 NFATC1O95644 943 aa20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 CST3P01034 146 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PFKFB1P16118 471 aa20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PTPN1P18031 435 aaKnown RBP20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 MDH1BQ5I0G3 518 aa20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 B3GALNT2Q8NCR0 500 aa20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 CRTAC1Q9NQ79 661 aa20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 ARHGAP26Q9UNA1 814 aa20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 SLC8A2Q9UPR5 921 aa20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 CCL26Q9Y258 94 aa20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PTPRZ1P23471 2315 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF10B-206ENST00000520109 FAM186AA6NE01 2351 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 CCDC163A0A0D9SF12 145 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 IKBKBO14920 756 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 ACTN4O43707 911 aaKnown RBP20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 ATP2C2O75185 946 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 RPL13P26373 211 aaKnown RBP20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 SATB1Q01826 763 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 SGSM1Q2NKQ1 1148 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 KMT5BQ4FZB7 885 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 TMEM196Q5HYL7 178 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 TXNDC11Q6PKC3 985 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 CCDC150Q8NCX0 1101 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 PARD3BQ8TEW8 1205 aa20.42■□□□□ 0.86
TNFRSF10B-206ENST00000520109 OVCA2Q8WZ82 227 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms