RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PPP4R1LQ9P1A2 415 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 KIF17Q9P2E2 1029 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 HSFX1Q9UBD0 423 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 SRP68Q9UHB9 627 aaKnown RBP6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 SCAF8Q9UPN6 1271 aaKnown RBP6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 HPSEQ9Y251 543 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 HS3ST4Q9Y661 456 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 A0A0B4J269 797 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 A0A1W2PS29 197 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 RRN3P2A6NIE6 340 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 LEFTY2O00292 366 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 CCNT2O60583 730 aaKnown RBP6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 SUN1O94901 812 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 RASAL1O95294 804 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 PLATP00750 562 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 CHRM3P20309 590 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 FGFR4P22455 802 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 ALDH18A1P54886 795 aaKnown RBP6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 ATP1A4Q13733 1029 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 KCNAB1Q14722 419 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZIK1Q3SY52 487 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 FOXR2Q6PJQ5 311 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 SLC30A10Q6XR72 485 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 SPOCD1Q6ZMY3 1216 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 KCTD20Q7Z5Y7 419 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 CLNKQ7Z7G1 428 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 MOGAT3Q86VF5 341 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 SPARTQ8N0X7 666 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZNF483Q8TF39 744 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 THAP4Q8WY91 577 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 SDCCAG3Q96C92 435 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 MNTQ99583 582 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 RTKNQ9BST9 563 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 SLC25A32Q9H2D1 315 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 PRDM8Q9NQV8 689 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 RNF181Q9P0P0 153 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 CHST2Q9Y4C5 530 aa6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 USP15Q9Y4E8 981 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P46-201ENST00000520062 CAPN14A8MX76 684 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 PCDH17O14917 1159 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 TRIM24O15164 1050 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 CD3EAPO15446 510 aaKnown RBP6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 FOXS1O43638 330 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 ACTL6BO94805 426 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 GPANK1O95872 356 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 VIPP01282 170 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 ADD2P35612 726 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 HLXQ14774 488 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 TIGD6Q17RP2 521 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 CLEC4GQ6UXB4 293 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 TMEM108Q6UXF1 575 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 PCGF5Q86SE9 256 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 RASGRP3Q8IV61 690 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 SLC44A2Q8IWA5 706 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 CCDC117Q8IWD4 279 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 NRSN1Q8IZ57 195 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 Q8NA96 180 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 NSUN7Q8NE18 718 aaKnown RBP6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 RUBCNQ92622 972 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 TOX2Q96NM4 488 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 PYM1Q9BRP8 204 aaKnown RBP6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 GPR87Q9BY21 358 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 PABPC3Q9H361 631 aaKnown RBP6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 SMOC2Q9H3U7 446 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 CXorf36Q9H7Y0 433 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 TERF2IPQ9NYB0 399 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 DNAJB11Q9UBS4 358 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 KCNE5Q9UJ90 142 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 DUSP10Q9Y6W6 482 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZNF536O15090 1300 aa6.16□□□□□ -1.42
HMGB1P46-201ENST00000520062 PRAMEF33A0A0G2JMD5 474 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 FCHO1O14526 889 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 TOR1BO14657 336 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 PAX4O43316 350 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 EPB41L2O43491 1005 aaKnown RBP6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 RGS10O43665 173 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 PRAMEF10O60809 474 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 SRGAP2O75044 1071 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 PYGLP06737 847 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 ARP10275 920 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 COMTP21964 271 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 APOBEC3AP31941 199 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 CNR2P34972 360 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 MAN2A2P49641 1150 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 PAPOLAP51003 745 aaKnown RBP6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 PNLIPRP1P54315 467 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 PRKAG1P54619 331 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 AP2B1P63010 937 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 OCA2Q04671 838 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 GPS1Q13098 491 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 DYRK1AQ13627 763 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 E2F2Q14209 437 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 SLC4A8Q2Y0W8 1093 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 TBC1D10BQ4KMP7 808 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 CERCAMQ5T4B2 595 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 ATPAF1Q5TC12 328 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 LRRTM4Q86VH4 590 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 SGMS1Q86VZ5 419 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 CIR1Q86X95 450 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms