RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 DDX23Q9BUQ8 820 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 BCO2Q9BYV7 579 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 FTOQ9C0B1 505 aaKnown RBP eCLIP3.05□□□□□ -1.92
MCF2-208ENST00000519895 S1PR5Q9H228 398 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 RPF1Q9H9Y2 349 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 CAPN10Q9HC96 672 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 EPS15L1Q9UBC2 864 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 CEP295Q9C0D2 2601 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 A0A087X0B3 334 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 FAM92AA1XBS5 289 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 ZNF233A6NK53 670 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 CLDN3O15551 220 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 GFPT2O94808 682 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 SETSIPP0DME0 302 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 GHRP10912 638 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 P4HA1P13674 534 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 TBXAS1P24557 533 aaPredicted RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 HSD3B2P26439 372 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 EEF1GP26641 437 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 ITPKBP27987 946 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 DNAJA1P31689 397 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 LIG4P49917 911 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 NPEPPSP55786 919 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 IGBP1P78318 339 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 RBP5P82980 135 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 FKBP3Q00688 224 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 CYP24A1Q07973 514 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 KCNH2Q12809 1159 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 KARSQ15046 597 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 EPC2Q52LR7 807 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 FIGNQ5HY92 759 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 PLA2G4FQ68DD2 849 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 KIAA1841Q6NSI8 718 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 SLC39A4Q6P5W5 647 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 KCNT2Q6UVM3 1135 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 CRELD2Q6UXH1 353 aaPredicted RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 MYCT1Q8N699 235 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 MRPL43Q8N983 215 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 PJA1Q8NG27 643 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 ENOX1Q8TC92 643 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 LRRC15Q8TF66 581 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 PIBF1Q8WXW3 757 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 CDK5RAP1Q96SZ6 601 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 PKMYT1Q99640 499 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 OSMRQ99650 979 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 ACBD6Q9BR61 282 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 TRIM62Q9BVG3 475 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 CHRDQ9H2X0 955 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 NRDE2Q9H7Z3 1164 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 SFXN1Q9H9B4 322 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 KIF9Q9HAQ2 790 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 AGPAT3Q9NRZ7 376 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 GJB4Q9NTQ9 266 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 TBC1D13Q9NVG8 400 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 ASNSD1Q9NWL6 643 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 FBXW11Q9UKB1 542 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 AGO2Q9UKV8 859 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 PNMA8BQ9ULN7 279 aaPredicted RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 MRPL42Q9Y6G3 142 aaKnown RBP3.05□□□□□ -1.92
MCF2-208ENST00000519895 XIRP2A4UGR9 3374 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 DOPEY2Q9Y3R5 2298 aa3.05□□□□□ -1.92
MCF2-208ENST00000519895 ARL5CA6NH57 179 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 K7ENM7 598 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 DDX39AO00148 427 aaKnown RBP3.04□□□□□ -1.92
MCF2-208ENST00000519895 PSMA7O14818 248 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 TGFB1I1O43294 461 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 CHMP2AO43633 222 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 NOL4O94818 638 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 VTNP04004 478 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 EDN1P05305 212 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 PSMC2P35998 433 aaKnown RBP3.04□□□□□ -1.92
MCF2-208ENST00000519895 ME1P48163 572 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 NLRP12P59046 1061 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 FANCCQ00597 558 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 CUL4BQ13620 913 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 NCOA4Q13772 614 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 SMTNL2Q2TAL5 461 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 KLHL40Q2TBA0 621 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 SLC10A6Q3KNW5 377 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 KMT5BQ4FZB7 885 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 ARHGAP17Q68EM7 881 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 FAM171BQ6P995 826 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 KLHDC10Q6PID8 442 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 VSTM1Q6UX27 236 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 PIP4P1Q86T03 277 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 SFR1Q86XK3 245 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 ANKMY2Q8IV38 441 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 DRC7Q8IY82 874 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 CRYBG2Q8N1P7 616 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 PHTF2Q8N3S3 785 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 METTL13Q8N6R0 699 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 FSIP1Q8NA03 581 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 SPPL2BQ8TCT7 592 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 SCFD1Q8WVM8 642 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 SMARCE1Q969G3 411 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 TMEM143Q96AN5 459 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 C18orf25Q96B23 403 aaPredicted RBP3.04□□□□□ -1.92
MCF2-208ENST00000519895 ANKRD36BP1Q96IX9 119 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 EPSTI1Q96J88 318 aa3.04□□□□□ -1.92
MCF2-208ENST00000519895 C8orf48Q96LL4 319 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms