RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 CRTAC1Q9NQ79 661 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 EXOC1Q9NV70 894 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 CCL26Q9Y258 94 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 COL4A2P08572 1712 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 KLRC4O43908 158 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 PHACTR2O75167 634 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 USP17L7P0C7H9 530 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 PSMC1P62191 440 aaKnown RBP27.05■■□□□ 1.92
VEGFA-220ENST00000519767 STK4Q13043 487 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 PDGFRLQ15198 375 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 SLC9A9Q8IVB4 645 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 GRAMD1CQ8IYS0 662 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 GPR161Q8N6U8 529 aaKnown RBP27.05■■□□□ 1.92
VEGFA-220ENST00000519767 STKLD1Q8NE28 680 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 OR6B3Q8NGW1 331 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 MYLPFQ96A32 169 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 SPATA32Q96LK8 384 aa27.05■■□□□ 1.92
VEGFA-220ENST00000519767 PATJQ8NI35 1801 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 TRAV19A0A0A6YYK7 116 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 PAPSS2O95340 614 aaPredicted RBP27.04■■□□□ 1.92
VEGFA-220ENST00000519767 BDNFP23560 247 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 ANXA13P27216 316 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 ID4P47928 161 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 PDE6CP51160 858 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 KRT85P78386 507 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 CYP27A1Q02318 531 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 FAM160A1Q05DH4 1040 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 PON2Q15165 354 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 CCDC142Q17RM4 750 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 KIAA2013Q8IYS2 634 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 MRPL45Q9BRJ2 306 aaKnown RBP27.04■■□□□ 1.92
VEGFA-220ENST00000519767 NCDNQ9UBB6 729 aa27.04■■□□□ 1.92
VEGFA-220ENST00000519767 NUP210Q8TEM1 1887 aaPredicted RBP27.04■■□□□ 1.92
VEGFA-220ENST00000519767 A0A1B0GVL5 298 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 TRIM66O15016 1216 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 PFKFB1P16118 471 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 PFKLP17858 780 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 CLDN10P78369 228 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 CCINQ13939 588 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 GAS6Q14393 721 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 EXOC4Q96A65 974 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 PCED1BQ96HM7 432 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 GZF1Q9H116 711 aaPredicted RBP27.03■■□□□ 1.92
VEGFA-220ENST00000519767 TRPC7Q9HCX4 862 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 RBM12Q9NTZ6 932 aaKnown RBP27.03■■□□□ 1.92
VEGFA-220ENST00000519767 DMAC2Q9NW81 257 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 ATP6V1DQ9Y5K8 247 aa27.03■■□□□ 1.92
VEGFA-220ENST00000519767 PDXKO00764 312 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 TADA3O75528 432 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 CKMP06732 381 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 PTPN1P18031 435 aaKnown RBP27.02■■□□□ 1.92
VEGFA-220ENST00000519767 PPP3CCP48454 512 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 MYL6P60660 151 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 SATB1Q01826 763 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 GRSF1Q12849 480 aaKnown RBP eCLIP27.02■■□□□ 1.92
VEGFA-220ENST00000519767 KMT5BQ4FZB7 885 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 DENND5BQ6ZUT9 1274 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 DCLK2Q8N568 766 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 PARD3BQ8TEW8 1205 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 C8orf48Q96LL4 319 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 CYP2S1Q96SQ9 504 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 EBF3Q9H4W6 596 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 VRTNQ9H8Y1 702 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 HPS4Q9NQG7 708 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 HPSEQ9Y251 543 aa27.02■■□□□ 1.92
VEGFA-220ENST00000519767 TRDMT1O14717 391 aaKnown RBP27.01■■□□□ 1.91
VEGFA-220ENST00000519767 HDCP19113 662 aa27.01■■□□□ 1.91
VEGFA-220ENST00000519767 MDH1BQ5I0G3 518 aa27.01■■□□□ 1.91
VEGFA-220ENST00000519767 KIAA0895Q8NCT3 520 aa27.01■■□□□ 1.91
VEGFA-220ENST00000519767 XYLT2Q9H1B5 865 aa27.01■■□□□ 1.91
VEGFA-220ENST00000519767 TRPM5Q9NZQ8 1165 aa27.01■■□□□ 1.91
VEGFA-220ENST00000519767 NXF1Q9UBU9 619 aaKnown RBP27.01■■□□□ 1.91
VEGFA-220ENST00000519767 SMG5Q9UPR3 1016 aaKnown RBP27.01■■□□□ 1.91
VEGFA-220ENST00000519767 DMXL1Q9Y485 3027 aa27.01■■□□□ 1.91
VEGFA-220ENST00000519767 A8MXQ7 604 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 KIF20AO95235 890 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 HOXA6P31267 233 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 CNR2P34972 360 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 NOP14P78316 857 aaKnown RBP27■■□□□ 1.91
VEGFA-220ENST00000519767 BIRC3Q13489 604 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 KCNB1Q14721 858 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 MTF1Q14872 753 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 TMEM196Q5HYL7 178 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 WDR44Q5JSH3 913 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 ERMP1Q7Z2K6 904 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 CCDC47Q96A33 483 aaKnown RBP27■■□□□ 1.91
VEGFA-220ENST00000519767 TTLL2Q9BWV7 592 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 ELOVL4Q9GZR5 314 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 SCAND2PQ9GZW5 306 aaPredicted RBP27■■□□□ 1.91
VEGFA-220ENST00000519767 GCNT4Q9P109 453 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 RAB23Q9ULC3 237 aa27■■□□□ 1.91
VEGFA-220ENST00000519767 ATG13O75143 517 aa26.99■■□□□ 1.91
VEGFA-220ENST00000519767 TCF3P15923 654 aa26.99■■□□□ 1.91
VEGFA-220ENST00000519767 SYKP43405 635 aa26.99■■□□□ 1.91
VEGFA-220ENST00000519767 TRIM68Q6AZZ1 485 aa26.99■■□□□ 1.91
VEGFA-220ENST00000519767 CPA6Q8N4T0 437 aa26.99■■□□□ 1.91
VEGFA-220ENST00000519767 ARL14EPQ8N8R7 260 aaPredicted RBP26.99■■□□□ 1.91
VEGFA-220ENST00000519767 OSCP1Q8WVF1 389 aa26.99■■□□□ 1.91
VEGFA-220ENST00000519767 SLC22A12Q96S37 553 aa26.99■■□□□ 1.91
VEGFA-220ENST00000519767 KCTD10Q9H3F6 313 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms