RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 CDX4O14627 284 aaPredicted RBP20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 NFATC1O95644 943 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 SPINK2P20155 84 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 PDE6CP51160 858 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 POSTNQ15063 836 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 ANO7Q6IWH7 933 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 RASSF3Q86WH2 238 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 EFCAB13Q8IY85 973 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 TMEM86AQ8N2M4 240 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 SH3RF2Q8TEC5 729 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 POMGNT1Q8WZA1 660 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 CNOT6LQ96LI5 555 aaKnown RBP20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 SLC22A12Q96S37 553 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 TPSD1Q9BZJ3 242 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 ST6GALNAC4Q9H4F1 302 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 SCN1AP35498 2009 aa20.36■□□□□ 0.85
CTNNA1-213ENST00000519113 IGF2RP11717 2491 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 TISP43B9A030 160 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 ALDH1A2O94788 518 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 TCF3P15923 654 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 DHPSP49366 369 aaPredicted RBP20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 COL9A2Q14055 689 aaPredicted RBP20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 MCM6Q14566 821 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 KCNB1Q14721 858 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 ZC2HC1CQ53FD0 456 aaPredicted RBP20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 C2orf27AQ580R0 203 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 INTS6LQ5JSJ4 861 aaKnown RBP20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 CRELD2Q6UXH1 353 aaPredicted RBP20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 SPATA2LQ8IUW3 424 aaPredicted RBP20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 ARL14EPQ8N8R7 260 aaPredicted RBP20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 RASSF8Q8NHQ8 419 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 BLOC1S4Q9NUP1 217 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 GCNT4Q9P109 453 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 L1RE1Q9UN81 338 aa20.35■□□□□ 0.85
CTNNA1-213ENST00000519113 HDCP19113 662 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 POLR2BP30876 1174 aaKnown RBP20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 SEC13P55735 322 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 IRX4P78413 519 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 LMAN2Q12907 356 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 UAP1L1Q3KQV9 507 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 CFAP221Q4G0U5 840 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 SPATA18Q8TC71 538 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 CACTINQ8WUQ7 758 aaKnown RBP20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 PIGKQ92643 395 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 RAD54LQ92698 747 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 FUBP3Q96I24 572 aaKnown RBP eCLIP20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 SCNM1Q9BWG6 230 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 TMEM121BQ9BXQ6 578 aaPredicted RBP20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 LINC00597Q9H2U6 94 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 EVLQ9UI08 416 aaPredicted RBP20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 GTF3C4Q9UKN8 822 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 MMP17Q9ULZ9 603 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 ARHGAP26Q9UNA1 814 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 AGAP1Q9UPQ3 857 aa20.34■□□□□ 0.85
CTNNA1-213ENST00000519113 PATE3B3GLJ2 98 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 K7EQS6 105 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 TULP1O00294 542 aaPredicted RBP20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 BCKDHBP21953 392 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 ACAT1P24752 427 aaKnown RBP20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 PCSK1P29120 753 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 LHX1P48742 406 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 TFAMQ00059 246 aaKnown RBP20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 CRY1Q16526 586 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 SCN4BQ8IWT1 228 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 LRRC52Q8N7C0 313 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 KRI1Q8N9T8 703 aaKnown RBP20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 GATA6Q92908 595 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 HVCN1Q96D96 273 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 PKMYT1Q99640 499 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 NUSAP1Q9BXS6 441 aaKnown RBP20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 SLC32A1Q9H598 525 aa20.33■□□□□ 0.85
CTNNA1-213ENST00000519113 ZFYVE26Q68DK2 2539 aa20.33■□□□□ 0.84
CTNNA1-213ENST00000519113 ZNF638Q14966 1978 aaKnown RBP20.33■□□□□ 0.84
CTNNA1-213ENST00000519113 DENND4CQ5VZ89 1909 aa20.33■□□□□ 0.84
CTNNA1-213ENST00000519113 ANK1P16157 1881 aa20.33■□□□□ 0.84
CTNNA1-213ENST00000519113 C2orf78A6NCI8 922 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 ITGB3P05106 788 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 PFKLP17858 780 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 PLCG1P19174 1290 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 ADSSP30520 456 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 OPRD1P41143 372 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 MRPS21P82921 87 aaKnown RBP20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 SKOR2Q2VWA4 1001 aaPredicted RBP20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 LPCAT2Q7L5N7 544 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 ZNF720Q7Z2F6 126 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 TTC30AQ86WT1 665 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 CCDC33Q8N5R6 958 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 DEFB124Q8NES8 71 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 MDGA1Q8NFP4 955 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 LRRC15Q8TF66 581 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 SPACA7Q96KW9 195 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 GDAP2Q9NXN4 497 aa20.32■□□□□ 0.84
CTNNA1-213ENST00000519113 MYMKA6NI61 221 aa20.31■□□□□ 0.84
CTNNA1-213ENST00000519113 TNFRSF10BO14763 440 aa20.31■□□□□ 0.84
CTNNA1-213ENST00000519113 MAP3K13O43283 966 aa20.31■□□□□ 0.84
CTNNA1-213ENST00000519113 TOP3BO95985 862 aaKnown RBP20.31■□□□□ 0.84
CTNNA1-213ENST00000519113 DPP6P42658 865 aa20.31■□□□□ 0.84
CTNNA1-213ENST00000519113 MAGEA11P43364 429 aa20.31■□□□□ 0.84
CTNNA1-213ENST00000519113 FOXD4L6Q3SYB3 417 aaPredicted RBP20.31■□□□□ 0.84
CTNNA1-213ENST00000519113 TRIM61Q5EBN2 209 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms