RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 CLDN5O00501 218 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 B3GAT3O94766 335 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 BRCC3P46736 316 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 TCTN1Q2MV58 587 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 GLE1Q53GS7 698 aaKnown RBP24.62■■□□□ 1.53
SLIT3-204ENST00000518140 FAM102AQ5T9C2 384 aaPredicted RBP24.62■■□□□ 1.53
SLIT3-204ENST00000518140 SCUBE3Q8IX30 993 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 RHOT1Q8IXI2 618 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 ANKRD52Q8NB46 1076 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 B3GNT5Q9BYG0 378 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 UBN1Q9NPG3 1134 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 KLHL11Q9NVR0 708 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 ESYT3A0FGR9 886 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 ERICH4A6NGS2 130 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 CCDC188H7C350 402 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 MAP2K7O14733 419 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 GRAP2O75791 330 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 ITGB1P05556 798 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 PTPN1P18031 435 aaKnown RBP24.61■■□□□ 1.53
SLIT3-204ENST00000518140 MNX1P50219 401 aaPredicted RBP24.61■■□□□ 1.53
SLIT3-204ENST00000518140 GRIK3Q13003 919 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 TRNP1Q6NT89 227 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 ZNF280BQ86YH2 543 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 PRELID2Q8N945 189 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 DBF4BQ8NFT6 615 aa24.61■■□□□ 1.53
SLIT3-204ENST00000518140 DDX43Q9NXZ2 648 aaKnown RBP24.61■■□□□ 1.53
SLIT3-204ENST00000518140 HEXIM1O94992 359 aaKnown RBP24.6■■□□□ 1.53
SLIT3-204ENST00000518140 PSMA2P25787 234 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 AARSP49588 968 aaKnown RBP eCLIP24.6■■□□□ 1.53
SLIT3-204ENST00000518140 PIGHQ14442 188 aaPredicted RBP24.6■■□□□ 1.53
SLIT3-204ENST00000518140 PAQR9Q6ZVX9 377 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 TMEM110Q86TL2 294 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 FUKQ8N0W3 1084 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 IPO4Q8TEX9 1081 aaKnown RBP24.6■■□□□ 1.53
SLIT3-204ENST00000518140 TNIP3Q96KP6 325 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 NAP1L3Q99457 506 aaPredicted RBP24.6■■□□□ 1.53
SLIT3-204ENST00000518140 PSTPIP1O43586 416 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 TUBBP07437 444 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 GUCY2DQ02846 1103 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 TUSC3Q13454 348 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 SIX1Q15475 284 aaPredicted RBP24.6■■□□□ 1.53
SLIT3-204ENST00000518140 NIPA2Q8N8Q9 360 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 ACSF2Q96CM8 615 aaPredicted RBP24.6■■□□□ 1.53
SLIT3-204ENST00000518140 CRTAC1Q9NQ79 661 aa24.6■■□□□ 1.53
SLIT3-204ENST00000518140 DDHD2O94830 711 aa24.59■■□□□ 1.53
SLIT3-204ENST00000518140 EOMESO95936 686 aa24.59■■□□□ 1.53
SLIT3-204ENST00000518140 RARAP10276 462 aa24.59■■□□□ 1.53
SLIT3-204ENST00000518140 BFSP2Q13515 415 aa24.59■■□□□ 1.53
SLIT3-204ENST00000518140 KHSRPQ92945 711 aaKnown RBP eCLIP24.59■■□□□ 1.53
SLIT3-204ENST00000518140 EPB41L5Q9HCM4 733 aa24.59■■□□□ 1.53
SLIT3-204ENST00000518140 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.59■■□□□ 1.53
SLIT3-204ENST00000518140 PAPSS1O43252 624 aaPredicted RBP24.58■■□□□ 1.53
SLIT3-204ENST00000518140 RAB6CQ53S08 254 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 MDH1BQ5I0G3 518 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 SH3PXD2AQ5TCZ1 1133 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 KATNAL2Q8IYT4 538 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 RNF25Q96BH1 459 aaPredicted RBP24.58■■□□□ 1.53
SLIT3-204ENST00000518140 HEMGNQ9BXL5 484 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 MIS12Q9H081 205 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 RAB6CQ9H0N0 254 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 CALCOCO1Q9P1Z2 691 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 PI4K2BG5E9Z4 385 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 ENPP3O14638 875 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 INPPL1O15357 1258 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 ERLIN1O75477 346 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 BEST1O76090 585 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 FAM163BP0C2L3 166 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 SETSIPP0DME0 302 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 BST2Q10589 180 aaKnown RBP24.58■■□□□ 1.53
SLIT3-204ENST00000518140 GLB1LQ6UWU2 654 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 OLFML1Q6UWY5 402 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 CLEC4CQ8WTT0 213 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 SCLYQ96I15 445 aa24.58■■□□□ 1.53
SLIT3-204ENST00000518140 HNRNPABQ99729 332 aaKnown RBP24.58■■□□□ 1.53
SLIT3-204ENST00000518140 MYBPHLA2RUH7 354 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 FSCN2O14926 492 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 TTI1O43156 1089 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 LRCH4O75427 683 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 FLT3P36888 993 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 RABGGTBP53611 331 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 BCAT1P54687 386 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 PLEKHG4Q58EX7 1191 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 TET1Q8NFU7 2136 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 STK32AQ8WU08 396 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 GDAP1L1Q96MZ0 367 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 RTP3Q9BQQ7 232 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 GDF3Q9NR23 364 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 MKI67P46013 3256 aaKnown RBP24.57■■□□□ 1.52
SLIT3-204ENST00000518140 IL1R2P27930 398 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 CARSP49589 748 aaKnown RBP24.57■■□□□ 1.52
SLIT3-204ENST00000518140 TTC27Q6P3X3 843 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 SLC39A5Q6ZMH5 540 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 TMEM86AQ8N2M4 240 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 FNIP1Q8TF40 1166 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 RXFP2Q8WXD0 754 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 CASKIN2Q8WXE0 1202 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 SEZ6LQ9BYH1 1024 aa24.57■■□□□ 1.52
SLIT3-204ENST00000518140 RALAP11233 206 aa24.56■■□□□ 1.52
SLIT3-204ENST00000518140 LCP1P13796 627 aa24.56■■□□□ 1.52
SLIT3-204ENST00000518140 LHX1P48742 406 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms