RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FERMT3Q86UX7 667 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 VSIG1Q86XK7 387 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 LRRC56Q8IYG6 542 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 RIBC1Q8N443 379 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 AFAP1L2Q8N4X5 818 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 SH2D3CQ8N5H7 860 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 ATP6V0D2Q8N8Y2 350 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 TTLL11Q8NHH1 800 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 CEP70Q8NHQ1 597 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 GIPC3Q8TF64 312 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 LPIN2Q92539 896 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 RPGRQ92834 1020 aaKnown RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 TMEM87BQ96K49 555 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 SPATA17Q96L03 361 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 CEP295NLQ96MC4 621 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 UROC1Q96N76 676 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 DHRS9Q9BPW9 319 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 ELAC2Q9BQ52 826 aaKnown RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 HEPHQ9BQS7 1158 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 DDX23Q9BUQ8 820 aaKnown RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 AGXT2Q9BYV1 514 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 OSBPL6Q9BZF3 934 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 TRPV6Q9H1D0 765 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 EPB41L4AQ9HCS5 686 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 NLRC4Q9NPP4 1024 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 C12orf4Q9NQ89 552 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 NMRK1Q9NWW6 199 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 MOCS1Q9NZB8 636 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 SELENONQ9NZV5 590 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 MBD2Q9UBB5 411 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 KLHL3Q9UH77 587 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 PALD1Q9ULE6 856 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 GUCA1BQ9UMX6 200 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 SNX12Q9UMY4 172 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 STX8Q9UNK0 236 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 B3GNT3Q9Y2A9 372 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 TACC3Q9Y6A5 838 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 ADGRB2O60241 1585 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 ABCC3O15438 1527 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 TEX51A0A1B0GUA7 166 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 MAGEB16A2A368 324 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 WDR91A4D1P6 747 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 ANKRD34BA5PLL1 514 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 UPK3BL1B0FP48 263 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 UPK3BL2E5RIL1 263 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 F8W031 263 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 H3BNX3 289 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF701M0R085 212 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 NMT2O60551 498 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 CCDC22O60826 627 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 DKC1O60832 514 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 KCNJ13O60928 360 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 PEX11AO75192 247 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 FKBP6O75344 327 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 UFL1O94874 794 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 KLHL2O95198 593 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 NDUFA10O95299 355 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 CBX7O95931 251 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 FOSP01100 380 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 FYNP06241 537 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 P4HA1P13674 534 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF18P17022 549 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 GARTP22102 1010 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 PTPN4P29074 926 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 TRIM23P36406 574 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF76P36508 570 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 CCNFP41002 786 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 UBA7P41226 1012 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 TMPOP42166 694 aaKnown RBP5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 SYKP43405 635 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 IFNAR2P48551 515 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 TUBP50607 506 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 GALK1P51570 392 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 HSD17B4P51659 736 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 NR1H2P55055 460 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 RTP1P59025 263 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 DLG4P78352 724 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 CHRNEQ04844 493 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 CDK18Q07002 472 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 TNK2Q07912 1038 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 RBL2Q08999 1139 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 GOLGA8FQ08AF8 430 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 GOLGA8DPQ0D2H9 430 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 STK3Q13188 491 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 HNRNPDQ14103 355 aaKnown RBP5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 KLHL38Q2WGJ6 581 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 BBS9Q3SYG4 887 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 FAM209AQ5JX71 171 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 C6orf10Q5SRN2 563 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF362Q5T0B9 420 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 LDLRAD1Q5T700 205 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 EFCAB2Q5VUJ9 269 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 FOXB2Q5VYV0 432 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 SLX4IPQ5VYV7 408 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 SLC6A19Q695T7 634 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 OTUD7BQ6GQQ9 843 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 CEP85Q6P2H3 762 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 RAD9BQ6WBX8 426 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 SLC30A10Q6XR72 485 aa5.04□□□□□ -1.6
HMGB1P19-201ENST00000517578 ADGRG6Q86SQ4 1221 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms