RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ANKRD13AQ8IZ07 590 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 PIP4K2CQ8TBX8 421 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 PRPF31Q8WWY3 499 aaKnown RBP11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 NT5C1AQ9BXI3 368 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 CYP4F11Q9HBI6 524 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 LRRC4BQ9NT99 713 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 GRHL1Q9NZI5 618 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 USP20Q9Y2K6 914 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 CHD4Q14839 1912 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 ANKRD63C9JTQ0 380 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 CBX6O95503 412 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 KCNA3P22001 575 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 ZNF157P51786 506 aaPredicted RBP11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 AMHR2Q16671 573 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 EPS8L1Q8TE68 723 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 USP33Q8TEY7 942 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 TEKT4Q8WW24 435 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 GMCL1Q96IK5 515 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 ZNF317Q96PQ6 595 aaPredicted RBP11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 ITGB3P05106 788 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 VHLP40337 213 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 PTGIRP43119 386 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 MDH1BQ5I0G3 518 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 C1orf146Q5VVC0 180 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 MTDHQ86UE4 582 aaKnown RBP11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 LCA5Q86VQ0 697 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 CHST13Q8NET6 341 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 GPRC5AQ8NFJ5 357 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 GPRASP2Q96D09 838 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 FAM163AQ96GL9 167 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 CACYBPQ9HB71 228 aaKnown RBP11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 KLK14Q9P0G3 267 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 WDR35Q9P2L0 1181 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 CHMP2BQ9UQN3 213 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 FRMPD4Q14CM0 1322 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 DOT1LQ8TEK3 1739 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 TMEM150BA6NC51 233 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 HBP1O60381 514 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 CHEK2O96017 543 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 TAC1P20366 129 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 GRIK1P39086 918 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 TPI1P60174 286 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 PTK6Q13882 451 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 PDE1CQ14123 709 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 PIGHQ14442 188 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 OTOP1Q7RTM1 612 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 TAS1R2Q8TE23 839 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 AKT1S1Q96B36 256 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 HPDLQ96IR7 371 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 UBA6A0AVT1 1052 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 ONECUT3O60422 494 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 KRT10P13645 584 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 FASTKD1Q53R41 847 aaKnown RBP11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 DCAF6Q58WW2 860 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 EFHD1Q9BUP0 239 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 SP110Q9HB58 689 aa11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 CICQ96RK0 1608 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA1-202ENST00000517417 ZBBXA8MT70 800 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 SLC25A27O95847 323 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 HMBSP08397 361 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 SULT1E1P49888 294 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 HSD17B4P51659 736 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 BNIP1Q12981 228 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 PCNX4Q63HM2 1172 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 RNF43Q68DV7 783 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 MFSD5Q6N075 450 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 URGCPQ8TCY9 931 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 STK32AQ8WU08 396 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 SCG3Q8WXD2 468 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 PPP1R36Q96LQ0 422 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 PDCD2LQ9BRP1 358 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 MTMR12Q9C0I1 747 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 BCAS3Q9H6U6 928 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 RNPEPL1Q9HAU8 725 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 PRMT7Q9NVM4 692 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 MARCOQ9UEW3 520 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 ZC3H7BQ9UGR2 993 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 MYO5AQ9Y4I1 1855 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 KPNA7A9QM74 516 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 APOEP02649 317 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 ENO1P06733 434 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 CREB1P16220 341 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 CALB2P22676 271 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 CPA2P48052 419 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 CLK2P49760 499 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 HUNKP57058 714 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 CLEC16AQ2KHT3 1053 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 KCNT1Q5JUK3 1230 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 XRRA1Q6P2D8 792 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 C3orf62Q6ZUJ4 267 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 FITM2Q8N6M3 262 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 CCDC124Q96CT7 223 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 LRRC19Q9H756 370 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 MANSC1Q9H8J5 431 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms