RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 SMOC1Q9H4F8 434 aa9.27□□□□□ -0.93
PABPC1-202ENST00000517403 PRM3Q9NNZ6 103 aa9.27□□□□□ -0.93
PABPC1-202ENST00000517403 GKN1Q9NS71 199 aa9.27□□□□□ -0.93
PABPC1-202ENST00000517403 CCDC39Q9UFE4 941 aa9.27□□□□□ -0.93
PABPC1-202ENST00000517403 ITGA11Q9UKX5 1188 aa9.27□□□□□ -0.93
PABPC1-202ENST00000517403 MAGED2Q9UNF1 606 aaPredicted RBP9.27□□□□□ -0.93
PABPC1-202ENST00000517403 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.27□□□□□ -0.93
PABPC1-202ENST00000517403 PPP6R2O75170 966 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 YEATS4O95619 227 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 KRT19P08727 400 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 PDGFRBP09619 1106 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 ZSCAN22P10073 491 aaPredicted RBP9.26□□□□□ -0.93
PABPC1-202ENST00000517403 PDCP20941 246 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 BDNFP23560 247 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 WEE1P30291 646 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 AFMP43652 599 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 CYP2J2P51589 502 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 MYL6P60660 151 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 POU5F1Q01860 360 aaKnown RBP9.26□□□□□ -0.93
PABPC1-202ENST00000517403 CYP24A1Q07973 514 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 TMEM196Q5HYL7 178 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 TDRD10Q5VZ19 366 aaKnown RBP9.26□□□□□ -0.93
PABPC1-202ENST00000517403 RESP18Q5W5W9 173 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 PAQR9Q6ZVX9 377 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 TRAPPC11Q7Z392 1133 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 ARL14EPQ8N8R7 260 aaPredicted RBP9.26□□□□□ -0.93
PABPC1-202ENST00000517403 ZMIZ2Q8NF64 920 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 FAM200AQ8TCP9 573 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 PCED1BQ96HM7 432 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 HPDLQ96IR7 371 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 MYRFLQ96LU7 910 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 ZNF560Q96MR9 790 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 CGRRF1Q99675 332 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 C7orf25Q9BPX7 421 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 ACBD6Q9BR61 282 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 OXCT2Q9BYC2 517 aaPredicted RBP9.26□□□□□ -0.93
PABPC1-202ENST00000517403 RNF38Q9H0F5 515 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 LINC00597Q9H2U6 94 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 GOLPH3LQ9H4A5 285 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 SLC39A2Q9NP94 309 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 OBP2AQ9NY56 170 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 SERTAD1Q9UHV2 236 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 DSEQ9UL01 958 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 ASB3Q9Y575 518 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 PCDHB5Q9Y5E4 795 aa9.26□□□□□ -0.93
PABPC1-202ENST00000517403 LRRIQ3A6PVS8 624 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 EIF3DO15371 548 aaKnown RBP eCLIP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 POLR2DO15514 142 aaKnown RBP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 CUTAO60888 179 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 OLFM2O95897 454 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 TMEM191BP0C7N4 346 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 SCP2P22307 547 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 WARSP23381 471 aaKnown RBP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 CDC25CP30307 473 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 OPRD1P41143 372 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 KPNA1P52294 538 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 CDH8P55286 799 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 SPEM2Q0P670 501 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 STK4Q13043 487 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 PSMD6Q15008 389 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 POSTNQ15063 836 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 SNRNP35Q16560 246 aaKnown RBP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 BMT2Q1RMZ1 405 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 RSPO4Q2I0M5 234 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 CFAP221Q4G0U5 840 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 ARHGAP29Q52LW3 1261 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 MDH1BQ5I0G3 518 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 SPOPLQ6IQ16 392 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 MAMSTRQ6ZN01 415 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 GPRIN1Q7Z2K8 1008 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 MON1AQ86VX9 555 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 RALGPS2Q86X27 583 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 SCN4BQ8IWT1 228 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 CCDC65Q8IXS2 484 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 SYCP3Q8IZU3 236 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 SPEM1Q8N4L4 309 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 TOP6BLQ8N6T0 577 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 TRMT2BQ96GJ1 504 aaKnown RBP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 ZFRQ96KR1 1074 aaKnown RBP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 TWNKQ96RR1 684 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 B3GNT5Q9BYG0 378 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 KCTD10Q9H3F6 313 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 ZSCAN16Q9H4T2 348 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-202ENST00000517403 TRPC7Q9HCX4 862 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 ZDHHC4Q9NPG8 344 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 KCNG1Q9UIX4 513 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 HCN2Q9UL51 889 aa9.25□□□□□ -0.93
PABPC1-202ENST00000517403 RCCD1A6NED2 376 aa9.24□□□□□ -0.93
PABPC1-202ENST00000517403 F8VP50 259 aa9.24□□□□□ -0.93
PABPC1-202ENST00000517403 MAN2B1O00754 1011 aa9.24□□□□□ -0.93
PABPC1-202ENST00000517403 RNF40O75150 1001 aa9.24□□□□□ -0.93
PABPC1-202ENST00000517403 BEST1O76090 585 aa9.24□□□□□ -0.93
PABPC1-202ENST00000517403 PAPSS2O95340 614 aaPredicted RBP9.24□□□□□ -0.93
PABPC1-202ENST00000517403 DLATP10515 647 aaKnown RBP9.24□□□□□ -0.93
PABPC1-202ENST00000517403 GJA4P35212 333 aa9.24□□□□□ -0.93
PABPC1-202ENST00000517403 TXLNAP40222 546 aa9.24□□□□□ -0.93
PABPC1-202ENST00000517403 PNPLA4P41247 253 aa9.24□□□□□ -0.93
PABPC1-202ENST00000517403 MAGEA9P43362 315 aa9.24□□□□□ -0.93
PABPC1-202ENST00000517403 TUFMP49411 452 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms