RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 APOC2P02655 101 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 C4BPAP04003 597 aaKnown RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 HMGCRP04035 888 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 SHBGP04278 402 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ERBB2P04626 1255 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CYP1A1P04798 512 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 MPOP05164 745 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 POLBP06746 335 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 FESP07332 822 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 SERPINA6P08185 405 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 NR3C2P08235 984 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 KRT19P08727 400 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 RSPH10BP0C881 870 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 TRIM49P0CI25 452 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 TRIM49CP0CI26 452 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 RBP3P10745 1247 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 MCF2P10911 925 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 VDRP11473 427 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CYP2C9P11712 490 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 HARSP12081 509 aaKnown RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 MLNP12872 115 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 GYS1P13807 737 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 PDGFRAP16234 1089 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CHRNB2P17787 502 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 PAMP19021 973 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CD58P19256 250 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 NCF2P19878 526 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 TAC1P20366 129 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ATP4AP20648 1035 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 TGM2P21980 687 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 RRM1P23921 792 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 KDELR1P24390 212 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 KLRK1P26718 216 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 SERPINB3P29508 390 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 TYK2P29597 1187 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ADSLP30566 484 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 SDC4P31431 198 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 HSPA1LP34931 641 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 PTPN7P35236 360 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 RPA3P35244 121 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 SPRP35270 261 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 HOXD13P35453 343 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 FDFT1P37268 417 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CAP2P40123 477 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ARL4AP40617 200 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ACADSBP45954 432 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 NPTX2P47972 431 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 PTDSS1P48651 473 aaKnown RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 NPY2RP49146 381 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CTCFP49711 727 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 VPS41P49754 854 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ALDH5A1P51649 535 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 HSD17B4P51659 736 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 STAT5BP51692 787 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CASP5P51878 434 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ZNF135P52742 658 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 SLC12A2P55011 1212 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 VCPP55072 806 aaKnown RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 HDAC4P56524 1084 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 BCAR1P56945 870 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 NAA20P61599 178 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 PSMC1P62191 440 aaKnown RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 NOP14P78316 857 aaKnown RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 RBP5P82980 135 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 COG7P83436 770 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 FMO1Q01740 532 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ROR1Q01973 937 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 DSG1Q02413 1049 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 PPP3CAQ08209 521 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ADCY1Q08828 1119 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 SPIRE1Q08AE8 756 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 AP1B1Q10567 949 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 IFRD2Q12894 506 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 PTK7Q13308 1070 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 MAMLD1Q13495 774 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 NAB1Q13506 487 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 IRF5Q13568 498 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CUL3Q13618 768 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 NCOA4Q13772 614 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ITGA9Q13797 1035 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 PGM5Q15124 567 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 MAPRE2Q15555 327 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 QPCTQ16769 361 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 UGP2Q16851 508 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 INSCQ1MX18 579 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ARL13BQ3SXY8 428 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 BBS9Q3SYG4 887 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 MMEL1Q495T6 779 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 MTERF2Q49AM1 385 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CBWD6Q4V339 395 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ZNF394Q53GI3 561 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 TNFAIP8L3Q5GJ75 292 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CBWD3Q5JTY5 395 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 EFHC1Q5JVL4 640 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CBWD5Q5RIA9 395 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 GRTP1Q5TC63 336 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 C1orf146Q5VVC0 180 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 SNX30Q5VWJ9 437 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 OR6B2Q6IFH4 312 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms