RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 GPANK1O95872 356 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 ITGA2BP08514 1039 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZSCAN22P10073 491 aaPredicted RBP3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 ACRV1P26436 265 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 MST1P26927 711 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 CST5P28325 142 aaPredicted RBP3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 PTDSS1P48651 473 aaKnown RBP3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 ITGA8P53708 1063 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 BCAT1P54687 386 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 TIAL1Q01085 375 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 MYO1EQ12965 1108 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 ATP1A4Q13733 1029 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 CNGB1Q14028 1251 aaPredicted RBP3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 CCNIQ14094 377 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 E2F2Q14209 437 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 CLCA4Q14CN2 919 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 RALBP1Q15311 655 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZNF124Q15973 351 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 FBXO47Q5MNV8 452 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 CERCAMQ5T4B2 595 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 MANEALQ5VSG8 457 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 ICE2Q659A1 982 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 TMPRSS6Q8IU80 811 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 CCDC28AQ8IWP9 274 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 COLGALT2Q8IYK4 626 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 MB21D1Q8N884 522 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 MBD3L2Q8NHZ7 208 aaPredicted RBP3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 C18orf8Q96DM3 657 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 RSPRY1Q96DX4 576 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 LRRC46Q96FV0 321 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 GALNT9Q9HCQ5 603 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 SAYSD1Q9NPB0 183 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 TBC1D23Q9NUY8 699 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 VSX1Q9NZR4 365 aaPredicted RBP3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 IGSF9Q9P2J2 1179 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 DKK2Q9UBU2 259 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 VPS51Q9UID3 782 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZMYND8Q9ULU4 1186 aaPredicted RBP3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 NFU1Q9UMS0 254 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 CDYLQ9Y232 598 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 PCDHGB3Q9Y5G1 929 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 COL15A1P39059 1388 aa3.88□□□□□ -1.79
RNU6-390P-201ENST00000516259 OTOL1A6NHN0 477 aaPredicted RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 AHRRA9YTQ3 701 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 M0R3H8 397 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 RAB27BO00194 218 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 DHHO43323 396 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 SH3BP5O60239 455 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 CCNT2O60583 730 aaKnown RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 ELANEP08246 267 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 CD53P19397 219 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 ACO1P21399 889 aaKnown RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 HIBADHP31937 336 aaKnown RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 APOBEC3AP31941 199 aaPredicted RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZEB1P37275 1124 aaPredicted RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 MCM2P49736 904 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 NDUFV1P49821 464 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 SCNN1GP51170 649 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZNF134P52741 427 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 KRT17Q04695 432 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 CYP2A13Q16696 494 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZIK1Q3SY52 487 aaPredicted RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 RABL3Q5HYI8 236 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 TMTC4Q5T4D3 741 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 B3GNTL1Q67FW5 361 aaPredicted RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 CRTC1Q6UUV9 634 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 Q6ZRM9 215 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 MMS22LQ6ZRQ5 1243 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 NRSN1Q8IZ57 195 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 FAM9AQ8IZU1 332 aaPredicted RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZNF808Q8N4W9 903 aaPredicted RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 TEX19Q8NA77 164 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 FEZF2Q8TBJ5 459 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 BPIFB1Q8TDL5 484 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 ABHD5Q8WTS1 349 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 RAPGEF4Q8WZA2 1011 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 USP13Q92995 863 aaPredicted RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 PCDHAC1Q9H158 963 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 GRHPRQ9UBQ7 328 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 DNAJB11Q9UBS4 358 aa3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 NDRG4Q9ULP0 352 aaKnown RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 MTO1Q9Y2Z2 717 aaKnown RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 USP15Q9Y4E8 981 aaPredicted RBP3.87□□□□□ -1.79
RNU6-390P-201ENST00000516259 H7C4K7 107 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 PROM1O43490 865 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 RPS6KA4O75676 772 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 PIAS2O75928 621 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 SRGNP10124 158 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 BMP7P18075 431 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 EPHA3P29320 983 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 ATICP31939 592 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 NPTX2P47972 431 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 SELENOPP49908 381 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 VAV2P52735 878 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 LILRA4P59901 499 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 RNASE9P60153 205 aaKnown RBP3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 CXADRP78310 365 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 JAG1P78504 1218 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 TOB2Q14106 344 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms