RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 NR3C1P04150 777 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 BDNFP23560 247 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 GNL1P36915 607 aaPredicted RBP18.89■□□□□ 0.61
SFXN1-212ENST00000515791 VSTM1Q6UX27 236 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 KRBA2Q6ZNG9 492 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 C4orf50Q6ZRC1 276 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 ZBTB44Q8NCP5 570 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 CSGALNACT1Q8TDX6 532 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 MSANTD3Q96H12 275 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 SLC22A12Q96S37 553 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 DPEP3Q9H4B8 488 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 LMAN1LQ9HAT1 526 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 GDPD2Q9HCC8 539 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 HPS4Q9NQG7 708 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 TDP1Q9NUW8 608 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 GCNT4Q9P109 453 aa18.89■□□□□ 0.61
SFXN1-212ENST00000515791 OTOL1A6NHN0 477 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-212ENST00000515791 SPECC1L-ADORA2AF8WAN1 911 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 CTHP32929 405 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 CACNA2D1P54289 1103 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 USP46P62068 366 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 CSTF1Q05048 431 aaKnown RBP18.88■□□□□ 0.61
SFXN1-212ENST00000515791 ZNF268Q14587 947 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-212ENST00000515791 MAPRE1Q15691 268 aaKnown RBP18.88■□□□□ 0.61
SFXN1-212ENST00000515791 RALGPS2Q86X27 583 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-212ENST00000515791 SCN4BQ8IWT1 228 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 ADSSL1Q8N142 457 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 FSIP1Q8NA03 581 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 SUMF1Q8NBK3 374 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 TTC8Q8TAM2 541 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 MRPS31Q92665 395 aaKnown RBP18.88■□□□□ 0.61
SFXN1-212ENST00000515791 ELMO3Q96BJ8 720 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 CEP295NLQ96MC4 621 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 CYP2S1Q96SQ9 504 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 SDCBP2Q9H190 292 aa18.88■□□□□ 0.61
SFXN1-212ENST00000515791 UXTQ9UBK9 157 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-212ENST00000515791 FAM186AA6NE01 2351 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 LILRB5O75023 590 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 ZNF202O95125 648 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 LMNAP02545 664 aaKnown RBP18.87■□□□□ 0.61
SFXN1-212ENST00000515791 PTPN1P18031 435 aaKnown RBP18.87■□□□□ 0.61
SFXN1-212ENST00000515791 AVPR1AP37288 418 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 AP3M2P53677 418 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 CDH8P55286 799 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 MCCD1P59942 119 aaPredicted RBP18.87■□□□□ 0.61
SFXN1-212ENST00000515791 PLCB2Q00722 1185 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 TRPC3Q13507 836 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 NFIL3Q16649 462 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 ZACNQ401N2 412 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 MDH1BQ5I0G3 518 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 C1orf228Q6PIY5 440 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 TSSK4Q6SA08 328 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 OR6B3Q8NGW1 331 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 TMC2Q8TDI7 906 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 SYAP1Q96A49 352 aaPredicted RBP18.87■□□□□ 0.61
SFXN1-212ENST00000515791 IER2Q9BTL4 223 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 TTLL2Q9BWV7 592 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 SMYD3Q9H7B4 428 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 GKN1Q9NS71 199 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 DMXL1Q9Y485 3027 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 ATP6V1DQ9Y5K8 247 aa18.87■□□□□ 0.61
SFXN1-212ENST00000515791 KPNA1P52294 538 aaPredicted RBP18.86■□□□□ 0.61
SFXN1-212ENST00000515791 TNNC1P63316 161 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 ZXDBP98169 803 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 CYP27A1Q02318 531 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 NCOA4Q13772 614 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 CCINQ13939 588 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 KCNB1Q14721 858 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 PAQR9Q6ZVX9 377 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 C8orf48Q96LL4 319 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 B3GNT5Q9BYG0 378 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 SNX25Q9H3E2 840 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 KIF9Q9HAQ2 790 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 RBM12Q9NTZ6 932 aaKnown RBP18.86■□□□□ 0.61
SFXN1-212ENST00000515791 NXF1Q9UBU9 619 aaKnown RBP18.86■□□□□ 0.61
SFXN1-212ENST00000515791 GVINP1Q7Z2Y8 2422 aa18.86■□□□□ 0.61
SFXN1-212ENST00000515791 ZNF638Q14966 1978 aaKnown RBP18.86■□□□□ 0.61
SFXN1-212ENST00000515791 C2orf78A6NCI8 922 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 A8MXQ7 604 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 MAPK13O15264 365 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 AKAP3O75969 853 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 NOP14P78316 857 aaKnown RBP18.85■□□□□ 0.61
SFXN1-212ENST00000515791 ZNF77Q15935 545 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 ITPRIPL2Q3MIP1 535 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 ZCWPW2Q504Y3 356 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 TRIM68Q6AZZ1 485 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 ZC3H14Q6PJT7 736 aaKnown RBP18.85■□□□□ 0.61
SFXN1-212ENST00000515791 SV2AQ7L0J3 742 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 B3GALNT2Q8NCR0 500 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 ZNF518BQ9C0D4 1074 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 THG1LQ9NWX6 298 aaKnown RBP18.85■□□□□ 0.61
SFXN1-212ENST00000515791 PCDHGA2Q9Y5H1 932 aa18.85■□□□□ 0.61
SFXN1-212ENST00000515791 DNAH14Q0VDD8 3507 aa18.84■□□□□ 0.61
SFXN1-212ENST00000515791 F8VP50 259 aa18.84■□□□□ 0.61
SFXN1-212ENST00000515791 CLDN5O00501 218 aa18.84■□□□□ 0.61
SFXN1-212ENST00000515791 IKBKBO14920 756 aa18.84■□□□□ 0.61
SFXN1-212ENST00000515791 TCF3P15923 654 aa18.84■□□□□ 0.61
SFXN1-212ENST00000515791 GRIK1P39086 918 aa18.84■□□□□ 0.61
SFXN1-212ENST00000515791 RAP1GAPP47736 663 aa18.84■□□□□ 0.61
SFXN1-212ENST00000515791 FAM160A1Q05DH4 1040 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms