RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 GEMIN8Q9NWZ8 242 aaKnown RBP5.89□□□□□ -1.47
SMARCA5-203ENST00000515531 DKK3Q9UBP4 350 aa5.89□□□□□ -1.47
SMARCA5-203ENST00000515531 ST3GAL5Q9UNP4 418 aa5.89□□□□□ -1.47
SMARCA5-203ENST00000515531 SSX2IPQ9Y2D8 614 aa5.89□□□□□ -1.47
SMARCA5-203ENST00000515531 SNX13Q9Y5W8 968 aa5.89□□□□□ -1.47
SMARCA5-203ENST00000515531 TRIM43BA6NCK2 446 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 MBD3L4A6NDZ8 208 aaPredicted RBP5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 MBD3L3A6NE82 208 aaPredicted RBP5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 LINC00473A8K010 186 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 SLC16A3O15427 465 aaKnown RBP5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 NDUFB7P17568 137 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 DGKEP52429 567 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 GALEQ14376 348 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 INSCQ1MX18 579 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 MICU3Q86XE3 530 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 DNAJC10Q8IXB1 793 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 ATG4AQ8WYN0 398 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 RFKQ969G6 155 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 PPP2R3CQ969Q6 453 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 TRIM43Q96BQ3 446 aaPredicted RBP5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 HAPLN3Q96S86 360 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 DDX21Q9NR30 783 aaKnown RBP eCLIP5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 TRMT13Q9NUP7 481 aaKnown RBP5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 HDAC9Q9UKV0 1011 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 FAM50BQ9Y247 325 aa5.88□□□□□ -1.47
SMARCA5-203ENST00000515531 GCOM1H8Y6P7 765 aaPredicted RBP5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 MGST3O14880 152 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 PQBP1O60828 265 aaKnown RBP5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 ONECUT2O95948 504 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 KCNA3P22001 575 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 KLRC1P26715 233 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 PDE6CP51160 858 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 ELLP55199 621 aaPredicted RBP5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 RPS16P62249 146 aaKnown RBP5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 HLTFQ14527 1009 aaKnown RBP eCLIP5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 COBLL1Q53SF7 1204 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 TREML2Q5T2D2 321 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 TSTD2Q5T7W7 516 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 DEPDC1Q5TB30 811 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 CYB5RLQ6IPT4 315 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 ZNF551Q7Z340 670 aaPredicted RBP5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 SESTD1Q86VW0 696 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 ARHGEF25Q86VW2 580 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 SPARTQ8N0X7 666 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 OR56A3Q8NH54 315 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 BPIFB1Q8TDL5 484 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 NELL1Q92832 810 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 CRAMP1Q96RY5 1269 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 APOL5Q9BWW9 433 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 CXorf36Q9H7Y0 433 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 XPNPEP3Q9NQH7 507 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 ARHGEF3Q9NR81 526 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 IL17RBQ9NRM6 502 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 ITGB1BP2Q9UKP3 347 aa5.87□□□□□ -1.47
SMARCA5-203ENST00000515531 RGS10O43665 173 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 EBLN1P0CF75 366 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 CLK3P49761 638 aaKnown RBP5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 PDE1AP54750 535 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 SP2Q02086 613 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 SAFBQ15424 915 aaKnown RBP eCLIP5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 ZIK1Q3SY52 487 aaPredicted RBP5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 MAVSQ7Z434 540 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 SMCR8Q8TEV9 937 aaPredicted RBP5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 OSCP1Q8WVF1 389 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 IPCEF1Q8WWN9 437 aaPredicted RBP5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 GLG1Q92896 1179 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 UROC1Q96N76 676 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 BTBD1Q9H0C5 482 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 CPNE5Q9HCH3 593 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 SERTAD4Q9NUC0 356 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 COL20A1Q9P218 1284 aa5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 CCNL1Q9UK58 526 aaPredicted RBP5.86□□□□□ -1.47
SMARCA5-203ENST00000515531 SPATA31A6Q5VVP1 1343 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 LOC102723971A0A1B0GUV8 181 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 A1L4Q6 167 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 RHPN2P1A8MT19 583 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 CCP110O43303 1012 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 RASAL1O95294 804 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 FESP07332 822 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 FAM163BP0C2L3 166 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 PRKAR1BP31321 381 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 PTH2RP49190 550 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 CCT8P50990 548 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 CLCN2P51788 898 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 NANOS3P60323 173 aaKnown RBP5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 SLC29A2Q14542 456 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 CACHD1Q5VU97 1274 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 FBXO42Q6P3S6 717 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 ZDHHC24Q6UX98 284 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 YAF2Q8IY57 180 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 LRRC71Q8N4P6 559 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 BOLLQ8N9W6 283 aaKnown RBP5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 XAGE5Q8WWM1 108 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 PHKBQ93100 1093 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 MSLNLQ96KJ4 702 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 STRBPQ96SI9 672 aaKnown RBP5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 TIMP4Q99727 224 aa5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 DPCDQ9BVM2 203 aaPredicted RBP5.85□□□□□ -1.47
SMARCA5-203ENST00000515531 SARGQ9BW04 601 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms