RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 USP33Q8TEY7 942 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 FUBP3Q96I24 572 aaKnown RBP eCLIP16.9■□□□□ 0.3
LMNA-223ENST00000515459 FAM213AQ9BRX8 229 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 LINC00597Q9H2U6 94 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 ZMIZ1Q9ULJ6 1067 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 EXOC7Q9UPT5 735 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 C2orf78A6NCI8 922 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 PPP1R37O75864 691 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 BMP15O95972 392 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 LDHAP00338 332 aaKnown RBP16.89■□□□□ 0.29
LMNA-223ENST00000515459 HDCP19113 662 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 CSRP1P21291 193 aaKnown RBP16.89■□□□□ 0.29
LMNA-223ENST00000515459 GJB2P29033 226 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 PCSK1P29120 753 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 LHX1P48742 406 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 PDE6CP51160 858 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 WNT7BP56706 349 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 GRIN1Q05586 938 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 DYMQ7RTS9 669 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 CYP2U1Q7Z449 544 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 BRSK2Q8IWQ3 736 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 ADGRF2Q8IZF7 708 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 CSGALNACT2Q8N6G5 542 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 CNOT6LQ96LI5 555 aaKnown RBP16.89■□□□□ 0.29
LMNA-223ENST00000515459 GDAP2Q9NXN4 497 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 ITGA11Q9UKX5 1188 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 ARHGAP26Q9UNA1 814 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 SNX9Q9Y5X1 595 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 PTPRDP23468 1912 aa16.89■□□□□ 0.29
LMNA-223ENST00000515459 PATE3B3GLJ2 98 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 K7EQS6 105 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 CDX4O14627 284 aaPredicted RBP16.88■□□□□ 0.29
LMNA-223ENST00000515459 GABRDO14764 452 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 KRT19P08727 400 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 OPRD1P41143 372 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 DHPSP49366 369 aaPredicted RBP16.88■□□□□ 0.29
LMNA-223ENST00000515459 SEC13P55735 322 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 CCDC142Q17RM4 750 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 C4orf50Q6ZRC1 276 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 OSTM1Q86WC4 334 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 TOP6BLQ8N6T0 577 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 KDF1Q8NAX2 398 aaPredicted RBP16.88■□□□□ 0.29
LMNA-223ENST00000515459 SAAL1Q96ER3 474 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 STRA6Q9BX79 667 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 ADAM33Q9BZ11 813 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 MRPL44Q9H9J2 332 aaKnown RBP16.88■□□□□ 0.29
LMNA-223ENST00000515459 RBAKQ9NYW8 714 aaPredicted RBP16.88■□□□□ 0.29
LMNA-223ENST00000515459 SEL1LQ9UBV2 794 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 MMP17Q9ULZ9 603 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 WASF3Q9UPY6 502 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 LAMA1P25391 3075 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 FAM208BQ5VWN6 2430 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 FRYQ5TBA9 3013 aa16.88■□□□□ 0.29
LMNA-223ENST00000515459 HCRTO43612 131 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 PFKLP17858 780 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 SPINK2P20155 84 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 BCKDHBP21953 392 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 MAGEA11P43364 429 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 IRX4P78413 519 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 MRPS21P82921 87 aaKnown RBP16.87■□□□□ 0.29
LMNA-223ENST00000515459 RBP5P82980 135 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 KCNA1Q09470 495 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 CRY1Q16526 586 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 FAM171BQ6P995 826 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 CCDC33Q8N5R6 958 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 ZSWIM2Q8NEG5 633 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 MDGA1Q8NFP4 955 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 CXorf38Q8TB03 319 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 ACCSQ96QU6 501 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 CACNA1GO43497 2377 aa16.87■□□□□ 0.29
LMNA-223ENST00000515459 TMEM8BA6NDV4 472 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 LEFTY2O00292 366 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 ALDH1A2O94788 518 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 SOWAHAQ2M3V2 549 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 UAP1L1Q3KQV9 507 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 L1TD1Q5T7N2 865 aaKnown RBP16.86■□□□□ 0.29
LMNA-223ENST00000515459 SCARA3Q6AZY7 606 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 VSTM1Q6UX27 236 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 DPH6Q7L8W6 267 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 TTC30AQ86WT1 665 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 PIGKQ92643 395 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 SPATA17Q96L03 361 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 CEP295NLQ96MC4 621 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 TRPM5Q9NZQ8 1165 aa16.86■□□□□ 0.29
LMNA-223ENST00000515459 MAGEC2Q9UBF1 373 aaPredicted RBP16.86■□□□□ 0.29
LMNA-223ENST00000515459 EVLQ9UI08 416 aaPredicted RBP16.86■□□□□ 0.29
LMNA-223ENST00000515459 TNRC6BQ9UPQ9 1833 aaKnown RBP16.86■□□□□ 0.29
LMNA-223ENST00000515459 MYMKA6NI61 221 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 ATP2C2O75185 946 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 GCNT3O95395 438 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 TMEM191BP0C7N4 346 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 GAP43P17677 238 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 GARTP22102 1010 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 GRIK1P39086 918 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 ZXDBP98169 803 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 LMAN2Q12907 356 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 MYO1EQ12965 1108 aa16.85■□□□□ 0.29
LMNA-223ENST00000515459 SF3A1Q15459 793 aaKnown RBP16.85■□□□□ 0.29
LMNA-223ENST00000515459 MAPRE1Q15691 268 aaKnown RBP16.85■□□□□ 0.29
LMNA-223ENST00000515459 GAB4Q2WGN9 574 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms