RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 RBM46Q8TBY0 533 aaKnown RBP13.8□□□□□ -0.2
TCOF1-214ENST00000515035 TRIM62Q9BVG3 475 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 PKP3Q9Y446 797 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 CEP170BQ9Y4F5 1589 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-214ENST00000515035 GLI1P08151 1106 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 RALBP11234 206 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 STILQ15468 1287 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 SLC15A2Q16348 729 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 MMP19Q99542 508 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 SH2D3AQ9BRG2 576 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 MKNK1Q9BUB5 465 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 CYTH3O43739 400 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 ENTPD3O75355 529 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 BCL10O95999 233 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 PTPN7P35236 360 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 EFNA5P52803 228 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 WASHC5Q12768 1159 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 DENND1BQ6P3S1 775 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 GJB7Q6PEY0 223 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 ATPAF2Q8N5M1 289 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 ZNF560Q96MR9 790 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 DCUN1D5Q9BTE7 237 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 ZNF609O15014 1411 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 C1orf232A0A0U1RR37 186 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 DNALI1O14645 258 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-214ENST00000515035 GRAP2O75791 330 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 PDK1Q15118 436 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 FEZF2Q8TBJ5 459 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 TMEM79Q9BSE2 394 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 PARVBQ9HBI1 364 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 WHRNQ9P202 907 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 KANSL1LA0AUZ9 987 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 ZNF263O14978 683 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 TRIM24O15164 1050 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 PYGMP11217 842 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 TPP2P29144 1249 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-214ENST00000515035 FUT11Q495W5 492 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 EPC2Q52LR7 807 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 C4orf22Q6V702 233 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 FBXO36Q8NEA4 188 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 TIPINQ9BVW5 301 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 CYLDQ9NQC7 956 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 RAB21Q9UL25 225 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 DNAJC16Q9Y2G8 782 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 PEX5P50542 639 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 ZC2HC1CQ53FD0 456 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-214ENST00000515035 RSBN1Q5VWQ0 802 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-214ENST00000515035 IRGCQ6NXR0 463 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 FUKQ8N0W3 1084 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 OR8H2Q8N162 312 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 ACTRT1Q8TDG2 376 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 HPS4Q9NQG7 708 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 ETAA1Q9NY74 926 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 DAGLAQ9Y4D2 1042 aa13.79□□□□□ -0.2
TCOF1-214ENST00000515035 ASB14A6NK59 587 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 CTDNEP1O95476 244 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 C4BPBP20851 252 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 PTGER2P43116 358 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 RAD51Q06609 339 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 MMRN1Q13201 1228 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 ITPK1Q13572 414 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 MIEF2Q96C03 454 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 NSUN4Q96CB9 384 aaKnown RBP13.78□□□□□ -0.2
TCOF1-214ENST00000515035 HES6Q96HZ4 224 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 AGAP1Q9UPQ3 857 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 NRXN1Q9ULB1 1477 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 KPNA4O00629 521 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-214ENST00000515035 ADARP55265 1226 aaKnown RBP13.78□□□□□ -0.2
TCOF1-214ENST00000515035 PWP1Q13610 501 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 MTFR1Q15390 333 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 FAM83EQ2M2I3 478 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 ATG9AQ7Z3C6 839 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 PRCCQ92733 491 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-214ENST00000515035 DCCP43146 1447 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 F8VZ95 297 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 EEF2KO00418 725 aaKnown RBP13.78□□□□□ -0.2
TCOF1-214ENST00000515035 STIP1P31948 543 aaKnown RBP13.78□□□□□ -0.2
TCOF1-214ENST00000515035 RFC5P40937 340 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 TRIP4Q15650 581 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-214ENST00000515035 HHIPL2Q6UWX4 724 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 SLC25A41Q8N5S1 370 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 RNF149Q8NC42 400 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 MAFGO15525 162 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 ASNA1O43681 348 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 SASH3O75995 380 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 FSBPO95073 299 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 NTSR2O95665 410 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 CSF1RP07333 972 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 TCF3P15923 654 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 NNMTP40261 264 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 HERVK_113P62684 666 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 SGO1Q5FBB7 561 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 FAXCQ5TGI0 409 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 LRRC8DQ7L1W4 858 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 TMPRSS6Q8IU80 811 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 VPS37AQ8NEZ2 397 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 TADA1Q96BN2 335 aa13.78□□□□□ -0.2
TCOF1-214ENST00000515035 PABPC5Q96DU9 382 aaKnown RBP13.78□□□□□ -0.2
TCOF1-214ENST00000515035 PAFAH2Q99487 392 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms