RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 MYLPFQ96A32 169 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 MSLNLQ96KJ4 702 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.39
HMGCL-209ENST00000513148 SFXN1Q9H9B4 322 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 APEX2Q9UBZ4 518 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 CCDC195A0A1B0GUA6 201 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 MGAT5BQ3V5L5 792 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 CCDC149Q6ZUS6 474 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 SPATA2LQ8IUW3 424 aaPredicted RBP17.51■□□□□ 0.39
HMGCL-209ENST00000513148 WHAMMQ8TF30 809 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 PCED1BQ96HM7 432 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 FAXDC2Q96IV6 333 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 TNIP3Q96KP6 325 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 NT5C1AQ9BXI3 368 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 ELOVL4Q9GZR5 314 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 SIX2Q9NPC8 291 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 FAM49BQ9NUQ9 324 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 CD207Q9UJ71 328 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 COG5Q9UP83 839 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 RRP15Q9Y3B9 282 aaKnown RBP17.51■□□□□ 0.39
HMGCL-209ENST00000513148 PCDHB5Q9Y5E4 795 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 INSL5Q9Y5Q6 135 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 C2orf16Q68DN1 1984 aa17.51■□□□□ 0.39
HMGCL-209ENST00000513148 LRRC10BA6NIK2 292 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 CCL16O15467 120 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 ZMYND10O75800 440 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 GCNT1Q02742 428 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 NFE2Q16621 373 aaPredicted RBP17.5■□□□□ 0.39
HMGCL-209ENST00000513148 ARHGAP44Q17R89 818 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 FAM171BQ6P995 826 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 UNC93AQ86WB7 457 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 TCEAL8Q8IYN2 117 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 C12orf29Q8N999 325 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 MYCBPAPQ8TBZ2 947 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 PCMTD1Q96MG8 357 aaPredicted RBP17.5■□□□□ 0.39
HMGCL-209ENST00000513148 KREMEN1Q96MU8 473 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 MYCBPQ99417 103 aaPredicted RBP17.5■□□□□ 0.39
HMGCL-209ENST00000513148 THEGQ9P2T0 379 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 POLR3GO15318 223 aaPredicted RBP17.5■□□□□ 0.39
HMGCL-209ENST00000513148 C1RP00736 705 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 CYP2F1P24903 491 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 YWHAEP62258 255 aaKnown RBP17.5■□□□□ 0.39
HMGCL-209ENST00000513148 TMEM270Q6UE05 265 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 SPPL2BQ8TCT7 592 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 HDAC7Q8WUI4 952 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 ARFGAP3Q9NP61 516 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 AJAP1Q9UKB5 411 aaPredicted RBP17.5■□□□□ 0.39
HMGCL-209ENST00000513148 ADAM21Q9UKJ8 722 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 YIPF1Q9Y548 306 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 PCDHB4Q9Y5E5 795 aa17.5■□□□□ 0.39
HMGCL-209ENST00000513148 PTPRDP23468 1912 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 CLDN5O00501 218 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 TEX33O43247 280 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 LRG1P02750 347 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 CCDC130P13994 396 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 HOXB8P17481 243 aaPredicted RBP17.49■□□□□ 0.39
HMGCL-209ENST00000513148 TWF1Q12792 350 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 MAPRE1Q15691 268 aaKnown RBP17.49■□□□□ 0.39
HMGCL-209ENST00000513148 FILIP1LQ4L180 1135 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 C4orf50Q6ZRC1 276 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 C10orf67Q8IYJ2 551 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 SMRP1Q8NCR6 262 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 FAM207AQ9NSI2 230 aaPredicted RBP17.49■□□□□ 0.39
HMGCL-209ENST00000513148 ZDHHC7Q9NXF8 308 aa17.49■□□□□ 0.39
HMGCL-209ENST00000513148 GOLGA6L9A6NEM1 432 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 TRIM21P19474 475 aaKnown RBP17.48■□□□□ 0.39
HMGCL-209ENST00000513148 BDNFP23560 247 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 RAD23BP54727 409 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 MFAP3P55082 362 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 FANCCQ00597 558 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 SMARCB1Q12824 385 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 TTC39CQ8N584 583 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 UBR7Q8N806 425 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 STKLD1Q8NE28 680 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 C2orf15Q8WU43 125 aaKnown RBP17.48■□□□□ 0.39
HMGCL-209ENST00000513148 HNRNPLLQ8WVV9 542 aaKnown RBP17.48■□□□□ 0.39
HMGCL-209ENST00000513148 TMEM176AQ96HP8 235 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 MED10Q9BTT4 135 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 PIDD1Q9HB75 910 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 DNAJC12Q9UKB3 198 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 KRT5P13647 590 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 ACO1P21399 889 aaKnown RBP17.48■□□□□ 0.39
HMGCL-209ENST00000513148 GPR15P49685 360 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 RAPGEF1Q13905 1077 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 BRD3Q15059 726 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 CES5AQ6NT32 575 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 SCN4BQ8IWT1 228 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 SUGP1Q8IWZ8 645 aaKnown RBP17.48■□□□□ 0.39
HMGCL-209ENST00000513148 CRYBG2Q8N1P7 616 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 SLC4A11Q8NBS3 891 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 GPR152Q8TDT2 470 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 SMG7Q92540 1137 aaKnown RBP17.48■□□□□ 0.39
HMGCL-209ENST00000513148 ZNF707Q96C28 371 aaPredicted RBP17.48■□□□□ 0.39
HMGCL-209ENST00000513148 HEXIM2Q96MH2 286 aaKnown RBP17.48■□□□□ 0.39
HMGCL-209ENST00000513148 B3GNT5Q9BYG0 378 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 ZNF518BQ9C0D4 1074 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 S1PR5Q9H228 398 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 JRKLQ9Y4A0 524 aa17.48■□□□□ 0.39
HMGCL-209ENST00000513148 MYH10P35580 1976 aa17.47■□□□□ 0.39
HMGCL-209ENST00000513148 MAP2K7O14733 419 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms