RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 HOXD12P35452 270 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 PRPHP41219 470 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 TAF6P49848 677 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 SIM1P81133 766 aaPredicted RBP14.99□□□□□ -0.01
SPCS3-204ENST00000513139 MRPS21P82921 87 aaKnown RBP14.99□□□□□ -0.01
SPCS3-204ENST00000513139 RAD51AP2Q09MP3 1159 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 CRY1Q16526 586 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 HYIQ5T013 277 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 WSCD1Q658N2 575 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 LMBRD2Q68DH5 695 aaPredicted RBP14.99□□□□□ -0.01
SPCS3-204ENST00000513139 PROSER1Q86XN7 944 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 FBXO18Q8NFZ0 1043 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 LEO1Q8WVC0 666 aaPredicted RBP14.99□□□□□ -0.01
SPCS3-204ENST00000513139 SPACA7Q96KW9 195 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 PYM1Q9BRP8 204 aaKnown RBP14.99□□□□□ -0.01
SPCS3-204ENST00000513139 ABCB6Q9NP58 842 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 MAGED2Q9UNF1 606 aaPredicted RBP14.99□□□□□ -0.01
SPCS3-204ENST00000513139 C2CD2Q9Y426 696 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 WNT6Q9Y6F9 365 aa14.99□□□□□ -0.01
SPCS3-204ENST00000513139 FLNBO75369 2602 aaKnown RBP14.98□□□□□ -0.01
SPCS3-204ENST00000513139 PCDH15Q96QU1 1955 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 PRPF40AO75400 957 aaKnown RBP14.98□□□□□ -0.01
SPCS3-204ENST00000513139 TADA3O75528 432 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 NOL4O94818 638 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 NFICP08651 508 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 ENGP17813 658 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 P2RY2P41231 377 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 CDR1P51861 262 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 SLC12A3P55017 1021 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 RPL10AP62906 217 aaKnown RBP14.98□□□□□ -0.01
SPCS3-204ENST00000513139 TSPY1Q01534 308 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 GNL2Q13823 731 aaKnown RBP14.98□□□□□ -0.01
SPCS3-204ENST00000513139 NBR1Q14596 966 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 HSF5Q4G112 596 aaPredicted RBP14.98□□□□□ -0.01
SPCS3-204ENST00000513139 C2orf27AQ580R0 203 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 PEAR1Q5VY43 1037 aaPredicted RBP14.98□□□□□ -0.01
SPCS3-204ENST00000513139 EFCAB13Q8IY85 973 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 MSTO1Q9BUK6 570 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 LIMCH1Q9UPQ0 1083 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 PLXNB3Q9ULL4 1909 aa14.98□□□□□ -0.01
SPCS3-204ENST00000513139 APC2O95996 2303 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 CELSR3Q9NYQ7 3312 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 KPNA7A9QM74 516 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 NFATC1O95644 943 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 CKMP06732 381 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 OPRD1P41143 372 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 MAPK8P45983 427 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 POU5F1Q01860 360 aaKnown RBP14.97□□□□□ -0.01
SPCS3-204ENST00000513139 BYSLQ13895 437 aaKnown RBP14.97□□□□□ -0.01
SPCS3-204ENST00000513139 HNRNPDQ14103 355 aaKnown RBP14.97□□□□□ -0.01
SPCS3-204ENST00000513139 IL17AQ16552 155 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 ZNF423Q2M1K9 1284 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 DTHD1Q6ZMT9 781 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 KIAA1958Q8N8K9 716 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 FSIP1Q8NA03 581 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 WHAMMQ8TF30 809 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 FNBP1Q96RU3 617 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 SLC22A12Q96S37 553 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 CYP2S1Q96SQ9 504 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 PI4K2AQ9BTU6 479 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 TMEM74BQ9NUR3 256 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 DPP3Q9NY33 737 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 GCNT4Q9P109 453 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 ODF2LQ9ULJ1 636 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 GPSM3Q9Y4H4 160 aa14.97□□□□□ -0.01
SPCS3-204ENST00000513139 SPAARA0A1B0GVQ0 90 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 PFKLP17858 780 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 ABCD1P33897 745 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 GPR15P49685 360 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 TOB1P50616 345 aaPredicted RBP14.96□□□□□ -0.01
SPCS3-204ENST00000513139 PDE6CP51160 858 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 ST3GAL1Q11201 340 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 SV2CQ496J9 727 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 TMEM92Q6UXU6 159 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 HDDC3Q8N4P3 179 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 CEP76Q8TAP6 659 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 SH3RF2Q8TEC5 729 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 ACBD6Q9BR61 282 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 LLPHQ9BRT6 129 aaKnown RBP14.96□□□□□ -0.01
SPCS3-204ENST00000513139 LINC00597Q9H2U6 94 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 TRPC7Q9HCX4 862 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 TMLHEQ9NVH6 421 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 PILRBQ9UKJ0 227 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 ARHGAP26Q9UNA1 814 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 PCDHB6Q9Y5E3 794 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 PTPRBP23467 1997 aa14.96□□□□□ -0.01
SPCS3-204ENST00000513139 BPTFQ12830 3046 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 PNPLA4P41247 253 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 PTGER3P43115 390 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 SEC13P55735 322 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 DDR2Q16832 855 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 DUOXA1Q1HG43 343 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 GAB4Q2WGN9 574 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 ARSHQ5FYA8 562 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 LYSMD4Q5XG99 296 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 SLC39A4Q6P5W5 647 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 RABEPKQ7Z6M1 372 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 RAB44Q7Z6P3 723 aaPredicted RBP14.95□□□□□ -0.02
SPCS3-204ENST00000513139 NT5DC4Q86YG4 428 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms