RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 DMWDQ09019 674 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 TWF1Q12792 350 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 POU4F2Q12837 409 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 ORC2Q13416 577 aaPredicted RBP6.4□□□□□ -1.38
GYPB-213ENST00000513128 GAS6Q14393 721 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 PUM1Q14671 1186 aaKnown RBP eCLIP6.4□□□□□ -1.38
GYPB-213ENST00000513128 LPAL2Q16609 132 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 SPRED3Q2MJR0 410 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 CTXN3Q4LDR2 81 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 STXBP5Q5T5C0 1151 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 HAUS3Q68CZ6 603 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 RINT1Q6NUQ1 792 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 MPZL3Q6UWV2 235 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 RTL10Q7L3V2 364 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 LSRQ86X29 649 aaPredicted RBP6.4□□□□□ -1.38
GYPB-213ENST00000513128 CCNJLQ8IV13 435 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 MAP4K3Q8IVH8 894 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 TRIM42Q8IWZ5 723 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 LRRC15Q8TF66 581 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 ATRIPQ8WXE1 791 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 CEP63Q96MT8 703 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 TBC1D32Q96NH3 1257 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 ACAP3Q96P50 834 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 LRRC3BQ96PB8 259 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 PGLYRP2Q96PD5 576 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 PNMA5Q96PV4 448 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 FERD3LQ96RJ6 166 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 PLIN2Q99541 437 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 TCHPQ9BT92 498 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 CCDC94Q9BW85 323 aaPredicted RBP6.4□□□□□ -1.38
GYPB-213ENST00000513128 MRPL4Q9BYD3 311 aaKnown RBP6.4□□□□□ -1.38
GYPB-213ENST00000513128 EPC1Q9H2F5 836 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 ZNF334Q9HCZ1 680 aaPredicted RBP6.4□□□□□ -1.38
GYPB-213ENST00000513128 PARD6AQ9NPB6 346 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 KMT5AQ9NQR1 393 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 PRMT8Q9NR22 394 aaPredicted RBP6.4□□□□□ -1.38
GYPB-213ENST00000513128 C2orf42Q9NWW7 574 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 ANKFY1Q9P2R3 1169 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 MAGEC2Q9UBF1 373 aaPredicted RBP6.4□□□□□ -1.38
GYPB-213ENST00000513128 LIMCH1Q9UPQ0 1083 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 SMG5Q9UPR3 1016 aaKnown RBP6.4□□□□□ -1.38
GYPB-213ENST00000513128 PCDHGA2Q9Y5H1 932 aa6.4□□□□□ -1.38
GYPB-213ENST00000513128 TIMM13Q9Y5L4 95 aaPredicted RBP6.4□□□□□ -1.38
GYPB-213ENST00000513128 NUP210Q8TEM1 1887 aaPredicted RBP6.4□□□□□ -1.39
GYPB-213ENST00000513128 CEP250Q9BV73 2442 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 OBSL1O75147 1896 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 FAM221AA4D161 298 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 ARNTLO00327 626 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 PPEF2O14830 753 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 MMP20O60882 483 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 SOAT2O75908 522 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 CXCL8P10145 99 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 MAPTP10636 758 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 MYL4P12829 197 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 EPB42P16452 691 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 U2AF2P26368 475 aaKnown RBP eCLIP6.39□□□□□ -1.39
GYPB-213ENST00000513128 GDI1P31150 447 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 ELF1P32519 619 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 RPL9P32969 192 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 TNFSF9P41273 254 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 RPS9P46781 194 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 TRAPPC10P48553 1259 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 ATXN1P54253 815 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 EPHA5P54756 1037 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 SATB1Q01826 763 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 KCNC4Q03721 635 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 CLCQ05315 142 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 SRSF5Q13243 272 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 DMP1Q13316 513 aaPredicted RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 PDIA5Q14554 519 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 TEAD2Q15562 447 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 ZRSR1Q15695 479 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 ZBTB6Q15916 424 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 ARSJQ5FYB0 599 aaPredicted RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 MRM1Q6IN84 353 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 ZNF852Q6ZMS4 543 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 GK5Q6ZS86 529 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 PDZD4Q76G19 769 aaPredicted RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 TMC8Q8IU68 726 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 TTC9BQ8N6N2 239 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 TMEM161BQ8NDZ6 487 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 BEST2Q8NFU1 509 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 OR13H1Q8NG92 308 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 SHKBP1Q8TBC3 707 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 ZSCAN18Q8TBC5 510 aaPredicted RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 DNASE1L2Q92874 299 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 SMARCD2Q92925 531 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 HHIPQ96QV1 700 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 TMEM209Q96SK2 561 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 NELL2Q99435 816 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 LLPHQ9BRT6 129 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 NTPCRQ9BSD7 190 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 TRMT61BQ9BVS5 477 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 ZCCHC2Q9C0B9 1178 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 BRD9Q9H8M2 597 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 LMAN1LQ9HAT1 526 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 ZFP14Q9HCL3 533 aa6.39□□□□□ -1.39
GYPB-213ENST00000513128 TOPORSQ9NS56 1045 aaPredicted RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 RBM12Q9NTZ6 932 aaKnown RBP6.39□□□□□ -1.39
GYPB-213ENST00000513128 SLC38A7Q9NVC3 462 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms