RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	SATB1	Q01826	763 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	DNM1	Q05193	864 aa	Known RBP	13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	FAM160A1	Q05DH4	1040 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PKP1	Q13835	747 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PDGFRL	Q15198	375 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SDHAF4	Q5VUM1	108 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SLC9A9	Q8IVB4	645 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	KIAA2013	Q8IYS2	634 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	FSIP1	Q8NA03	581 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SECISBP2L	Q93073	1101 aa	Known RBP	13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CHFR	Q96EP1	664 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SYT15	Q9BQS2	421 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TTLL2	Q9BWV7	592 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	XYLT2	Q9H1B5	865 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	BLZF1	Q9H2G9	400 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SLC39A2	Q9NP94	309 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	DMAC2	Q9NW81	257 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	DLL3	Q9NYJ7	618 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	EHD2	Q9NZN4	543 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	GCNT4	Q9P109	453 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	USP25	Q9UHP3	1055 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SMG5	Q9UPR3	1016 aa	Known RBP	13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ANAPC1	Q9H1A4	1944 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TULP1	O00294	542 aa	Predicted RBP	13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ACTN4	O43707	911 aa	Known RBP	13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	USP17L7	P0C7H9	530 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CASP1	P29466	404 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	AFM	P43652	599 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PDE6C	P51160	858 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CYP2J2	P51589	502 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	NOP14	P78316	857 aa	Known RBP	13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PON2	Q15165	354 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CCDC142	Q17RM4	750 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	WDR72	Q3MJ13	1102 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	NELFCD	Q8IXH7	590 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CEP57L1	Q8IYX8	460 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	RIN3	Q8TB24	985 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CCDC127	Q96BQ5	260 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	RMDN1	Q96DB5	314 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PAGE5	Q96GU1	130 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PCED1B	Q96HM7	432 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	C8orf48	Q96LL4	319 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CYP2S1	Q96SQ9	504 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	MMS19	Q96T76	1030 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	RBM12	Q9NTZ6	932 aa	Known RBP	13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PTPRD	P23468	1912 aa		13.41	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TRAV19	A0A0A6YYK7	116 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CCDC163	A0A0D9SF12	145 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	FAM237A	A0A1B0GTK4	181 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TRIM66	O15016	1216 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PDGFRB	P09619	1106 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PTPN1	P18031	435 aa	Known RBP	13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SDHB	P21912	280 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	BDNF	P23560	247 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	STK4	Q13043	487 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ZNF77	Q15935	545 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	DENND5B	Q6ZUT9	1274 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	LONP2	Q86WA8	852 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SCN4B	Q8IWT1	228 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TTC8	Q8TAM2	541 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PARD3B	Q8TEW8	1205 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	OSCP1	Q8WVF1	389 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	MYLPF	Q96A32	169 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SYAP1	Q96A49	352 aa	Predicted RBP	13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SLC22A12	Q96S37	553 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	HINFP	Q9BQA5	517 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	MRPL45	Q9BRJ2	306 aa	Known RBP	13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SNX25	Q9H3E2	840 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	EBF3	Q9H4W6	596 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	NCDN	Q9UBB6	729 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SERTAD1	Q9UHV2	236 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ARHGAP26	Q9UNA1	814 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	HPSE	Q9Y251	543 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	NME7	Q9Y5B8	376 aa		13.4	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CHURC1-FNTB	B4DL54	471 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	PDXK	O00764	312 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	HR	O43593	1189 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	EXOC3	O60645	756 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	LRP3	O75074	770 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	ATG13	O75143	517 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	C4BPA	P04003	597 aa	Known RBP	13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	HDC	P19113	662 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	DRD1	P21728	446 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	GRIK1	P39086	918 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	MCCD1	P59942	119 aa	Predicted RBP	13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	MYL6	P60660	151 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	PSMC1	P62191	440 aa	Known RBP	13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	TRPC3	Q13507	836 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	MTF1	Q14872	753 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	TRIM68	Q6AZZ1	485 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	LAIR1	Q6GTX8	287 aa		13.39	□□□□□ -0.27
UBE2D3-231	ENST00000513098	FSTL4	Q6MZW2	842 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms