RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 EGFP01133 1207 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 CAPNS1P04632 268 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 SPATA31C1P0DKV0 1188 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 U2AF2P26368 475 aaKnown RBP eCLIP13.4□□□□□ -0.26
SDHA-215ENST00000512962 CDR1P51861 262 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 OSTNP61366 133 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 SSRP1Q08945 709 aaKnown RBP13.4□□□□□ -0.26
SDHA-215ENST00000512962 XKR4Q5GH76 650 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 BMP2KLQ5H9B9 411 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 TMEM196Q5HYL7 178 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 TPGS2Q68CL5 300 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 IQCEQ6IPM2 695 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 BLOC1S2Q6QNY1 142 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 ALKAL1Q6UXT8 129 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 UROC1Q96N76 676 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 BBC3Q96PG8 261 aaPredicted RBP13.4□□□□□ -0.26
SDHA-215ENST00000512962 HPS4Q9NQG7 708 aa13.4□□□□□ -0.26
SDHA-215ENST00000512962 CACNA1EQ15878 2313 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 CCDC194A0A1B0GVG4 234 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 SYN3O14994 580 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 TRAPPC3O43617 180 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 AKAP3O75969 853 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 CAVIN2O95810 425 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 GCFC2P16383 781 aaKnown RBP13.39□□□□□ -0.27
SDHA-215ENST00000512962 CYP4F8P98187 520 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 LBRQ14739 615 aaKnown RBP13.39□□□□□ -0.27
SDHA-215ENST00000512962 TRIM68Q6AZZ1 485 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 C19orf48Q6RUI8 117 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 ZBTB8OSQ8IWT0 167 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 ELMOD1Q8N336 334 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 SYNPOQ8N3V7 929 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 BEST2Q8NFU1 509 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 CDT1Q9H211 546 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 VTI1BQ9UEU0 232 aa13.39□□□□□ -0.27
SDHA-215ENST00000512962 ZNF638Q14966 1978 aaKnown RBP13.39□□□□□ -0.27
SDHA-215ENST00000512962 MED24O75448 989 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 CEACAM1P13688 526 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 CPB1P15086 417 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 CSRP1P21291 193 aaKnown RBP13.38□□□□□ -0.27
SDHA-215ENST00000512962 BCKDHBP21953 392 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 PTSQ03393 145 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 STK3Q13188 491 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 MAPK6Q16659 721 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 DCAF4L1Q3SXM0 396 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 ARHGAP29Q52LW3 1261 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 C1orf228Q6PIY5 440 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 RIPOR1Q6ZS17 1223 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
SDHA-215ENST00000512962 TRIM22Q8IYM9 498 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 LEMD2Q8NC56 503 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 E2F7Q96AV8 911 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 CCDC43Q96MW1 224 aaKnown RBP13.38□□□□□ -0.27
SDHA-215ENST00000512962 TMEM209Q96SK2 561 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 ADPGKQ9BRR6 497 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 TUBGCP4Q9UGJ1 667 aa13.38□□□□□ -0.27
SDHA-215ENST00000512962 TIMM13Q9Y5L4 95 aaPredicted RBP13.38□□□□□ -0.27
SDHA-215ENST00000512962 PLXNB3Q9ULL4 1909 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 SPAARA0A1B0GVQ0 90 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 SLC35F4A4IF30 521 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 H7C4K7 107 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 ABLIM1O14639 778 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 MARCH6O60337 910 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 PHACTR2O75167 634 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 FAM157BP0CG42 384 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 ATP2B1P20020 1258 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 HSPA4P34932 840 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 DUSP4Q13115 394 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 GPR158Q5T848 1215 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 ATF7IP2Q5U623 682 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 GALNT17Q6IS24 598 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 ZNF280DQ6N043 979 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 BPIFB1Q8TDL5 484 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 TNFRSF25Q93038 417 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 TBC1D32Q96NH3 1257 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 TTC12Q9H892 705 aaPredicted RBP13.37□□□□□ -0.27
SDHA-215ENST00000512962 TMEM9BQ9NQ34 198 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 SLC8A2Q9UPR5 921 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 CCL26Q9Y258 94 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 NEUROG3Q9Y4Z2 214 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 BPTFQ12830 3046 aa13.37□□□□□ -0.27
SDHA-215ENST00000512962 ARSAP15289 507 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 GABRR2P28476 465 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 MCM4P33991 863 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 FAM193AP78312 1265 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 IRX4P78413 519 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 UBAP2LQ14157 1087 aaKnown RBP13.36□□□□□ -0.27
SDHA-215ENST00000512962 UAP1L1Q3KQV9 507 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 ITPRIPL2Q3MIP1 535 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 SEZ6Q53EL9 994 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 DAB2IPQ5VWQ8 1189 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 PMS2CLQ68D20 193 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 CATSPER3Q86XQ3 398 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 SLFN12Q8IYM2 578 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 CCDC74AQ96AQ1 378 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 LPIN3Q9BQK8 851 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 FAM83CQ9BQN1 747 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 TPSD1Q9BZJ3 242 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 GPR88Q9GZN0 384 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 C2orf40Q9H1Z8 148 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 ATXN3LQ9H3M9 355 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms