RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 TRMT11Q7Z4G4 463 aaKnown RBP10.21□□□□□ -0.77
CLCN3-208ENST00000512813 LSMEM2Q8N112 164 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 FANCBQ8NB91 859 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 CADM4Q8NFZ8 388 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 C1orf216Q8TAB5 229 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 KCNV2Q8TDN2 545 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 RFFLQ8WZ73 363 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 IGSF8Q969P0 613 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 RILPL2Q969X0 211 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 MTMR9Q96QG7 549 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 MTA3Q9BTC8 594 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 TMEM206Q9H813 350 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 CD248Q9HCU0 757 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 DIAPH3Q9NSV4 1193 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 DAXXQ9UER7 740 aaPredicted RBP10.21□□□□□ -0.77
CLCN3-208ENST00000512813 CLCA2Q9UQC9 943 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 TAF6LQ9Y6J9 622 aa10.21□□□□□ -0.77
CLCN3-208ENST00000512813 A0A1W2PQF6 199 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 ZBTB24O43167 697 aaPredicted RBP10.2□□□□□ -0.78
CLCN3-208ENST00000512813 LARGE1O95461 756 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 SFTPCP11686 197 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 NCAM1P13591 858 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 TCF3P15923 654 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 MARCKSP29966 332 aaPredicted RBP10.2□□□□□ -0.78
CLCN3-208ENST00000512813 CD6P30203 668 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 ARL2P36404 184 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 GRIA2P42262 883 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 TUFMP49411 452 aaKnown RBP10.2□□□□□ -0.78
CLCN3-208ENST00000512813 FUT2Q10981 343 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 ILKQ13418 452 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 MYBPC2Q14324 1141 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 TAF12Q16514 161 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 DCAF4L1Q3SXM0 396 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 XKR9Q5GH70 373 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 CDCA2Q69YH5 1023 aaPredicted RBP10.2□□□□□ -0.78
CLCN3-208ENST00000512813 OTUD6AQ7L8S5 288 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 RAB11FIP4Q86YS3 637 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 C4orf19Q8IY42 314 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 TMTC2Q8N394 836 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 MRPS31Q92665 395 aaKnown RBP10.2□□□□□ -0.78
CLCN3-208ENST00000512813 SPENQ96T58 3664 aaKnown RBP10.2□□□□□ -0.78
CLCN3-208ENST00000512813 ZMYND12Q9H0C1 365 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 LINC00597Q9H2U6 94 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 SNX11Q9Y5W9 270 aa10.2□□□□□ -0.78
CLCN3-208ENST00000512813 HIVEP1P15822 2718 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 PHLPP2Q6ZVD8 1323 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 M0QZQ0 153 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 CBX4O00257 560 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 EML1O00423 815 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 SH2B2O14492 632 aaPredicted RBP10.19□□□□□ -0.78
CLCN3-208ENST00000512813 CYP17A1P05093 508 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 P4HBP07237 508 aaKnown RBP10.19□□□□□ -0.78
CLCN3-208ENST00000512813 SLC6A11P48066 632 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 CSNK1EP49674 416 aaKnown RBP10.19□□□□□ -0.78
CLCN3-208ENST00000512813 AFF3P51826 1226 aaKnown RBP10.19□□□□□ -0.78
CLCN3-208ENST00000512813 Q4G0T1 1027 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 DCAF12L1Q5VU92 463 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 EEF1DP3Q658K8 133 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 CCDC81Q6ZN84 652 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 CNDP2Q96KP4 475 aaKnown RBP10.19□□□□□ -0.78
CLCN3-208ENST00000512813 SEPT5Q99719 369 aaPredicted RBP10.19□□□□□ -0.78
CLCN3-208ENST00000512813 EPN3Q9H201 632 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 ARHGEF4Q9NR80 690 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 WSB2Q9NYS7 404 aaPredicted RBP10.19□□□□□ -0.78
CLCN3-208ENST00000512813 SPG11Q96JI7 2443 aa10.19□□□□□ -0.78
CLCN3-208ENST00000512813 LRRIQ4A6NIV6 560 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 H0Y8X5 98 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 PPFIA2O75334 1257 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 LDOC1O95751 146 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-208ENST00000512813 ITGB2P05107 769 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 USP17L7P0C7H9 530 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 HMGA1P17096 107 aaKnown RBP10.18□□□□□ -0.78
CLCN3-208ENST00000512813 INHBCP55103 352 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 SKOR1P84550 965 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 RESTQ13127 1097 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 PRPF4BQ13523 1007 aaKnown RBP10.18□□□□□ -0.78
CLCN3-208ENST00000512813 TMEM132AQ24JP5 1023 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 CASC1Q6TDU7 716 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 ALKAL1Q6UXT8 129 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 C12orf40Q86WS4 652 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 TTC16Q8NEE8 873 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 ETNPPLQ8TBG4 499 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 TOE1Q96GM8 510 aaKnown RBP10.18□□□□□ -0.78
CLCN3-208ENST00000512813 VCPIP1Q96JH7 1222 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 LXNQ9BS40 222 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 C6orf50Q9HD87 102 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 ASCL3Q9NQ33 180 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 TOPORSQ9NS56 1045 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-208ENST00000512813 EIF2B4Q9UI10 523 aaKnown RBP10.18□□□□□ -0.78
CLCN3-208ENST00000512813 ANKRD6Q9Y2G4 727 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 SLC12A7Q9Y666 1083 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 V9GY48 417 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-208ENST00000512813 DNHD1Q96M86 4753 aa10.18□□□□□ -0.78
CLCN3-208ENST00000512813 NAV3Q8IVL0 2385 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 STK36Q9NRP7 1315 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 METTL12A8MUP2 240 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.17□□□□□ -0.78
CLCN3-208ENST00000512813 HIP1O00291 1037 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 TADA3O75528 432 aa10.17□□□□□ -0.78
CLCN3-208ENST00000512813 DGAT1O75907 488 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms