RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	UNC13D	Q70J99	1090 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	DOK3	Q7L591	496 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	GPRIN1	Q7Z2K8	1008 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	SGMS1	Q86VZ5	419 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	SDR16C5	Q8N3Y7	309 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	AOPEP	Q8N6M6	819 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	OR52N2	Q8NGI0	321 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	C18orf8	Q96DM3	657 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	BORCS6	Q96GS4	357 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	SNX22	Q96L94	193 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	RMDN3	Q96TC7	470 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	TEX101	Q9BY14	249 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	PANK3	Q9H999	370 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	TM7SF3	Q9NS93	570 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	MYO1A	Q9UBC5	1043 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	FBXO9	Q9UK97	447 aa	Predicted RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	PRDM4	Q9UKN5	801 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	HDAC9	Q9UKV0	1011 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	USP15	Q9Y4E8	981 aa	Predicted RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	TDRD9	Q8NDG6	1382 aa	Known RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	DISP3	Q9P2K9	1392 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	PIK3C2G	O75747	1445 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	TRO	Q12816	1431 aa	Predicted RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	FAM135A	Q9P2D6	1515 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	GPATCH8	Q9UKJ3	1502 aa	Known RBP	4.09	□□□□□ -1.75
CAST-238	ENST00000512620	UNC13B	O14795	1591 aa		4.09	□□□□□ -1.75
CAST-238	ENST00000512620	CEP152	O94986	1710 aa		4.09	□□□□□ -1.76
CAST-238	ENST00000512620		A0A0U1RQG5	324 aa	Predicted RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	RTEL1-TNFRSF6B	F6WH68	1400 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	PYCARD-AS1	I3L0S3	204 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620		M0R3H8	397 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	MYO1C	O00159	1063 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	ZNF185	O15231	689 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	IRAK2	O43187	625 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	PLA2G6	O60733	806 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	NUP155	O75694	1391 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	RAD17	O75943	681 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	IPO13	O94829	963 aa	Known RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	MT-ND5	P03915	603 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	ANXA2	P07355	339 aa	Known RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	PIM1	P11309	404 aa	Predicted RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	IL1R1	P14778	569 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	PTMS	P20962	102 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	KDM5A	P29375	1690 aa	Known RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	MAN1A1	P33908	653 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	CASP2	P42575	452 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	ITGA8	P53708	1063 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	RNASE9	P60153	205 aa	Known RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	MXRA7	P84157	204 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	NUP160	Q12769	1436 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	ARHGEF5	Q12774	1597 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	TBX2	Q13207	712 aa	Predicted RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	NFIX	Q14938	502 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	SURF1	Q15526	300 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	SLC4A8	Q2Y0W8	1093 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	ZACN	Q401N2	412 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	C1QL3	Q5VWW1	255 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	FBXO38	Q6PIJ6	1188 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	CCDC141	Q6ZP82	1450 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	CIR1	Q86X95	450 aa	Predicted RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	ZFPM1	Q8IX07	1006 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	ASXL1	Q8IXJ9	1541 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	CACNA2D3	Q8IZS8	1091 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	NGEF	Q8N5V2	710 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	MDGA1	Q8NFP4	955 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	MUL1	Q969V5	352 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	TRIM44	Q96DX7	344 aa	Predicted RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	MPP4	Q96JB8	637 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	TESK2	Q96S53	571 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	MAP7D2	Q96T17	732 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	TMEM120A	Q9BXJ8	343 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	DPH1	Q9BZG8	443 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	ZNF518B	Q9C0D4	1074 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	XYLT2	Q9H1B5	865 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	SMOC2	Q9H3U7	446 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	GPR35	Q9HC97	309 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	RLIM	Q9NVW2	624 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	SAGE1	Q9NXZ1	904 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	XPR1	Q9UBH6	696 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	GPR52	Q9Y2T5	361 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	TMX2	Q9Y320	296 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	WDR7	Q9Y4E6	1490 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	LRRFIP2	Q9Y608	721 aa	Known RBP	4.08	□□□□□ -1.76
CAST-238	ENST00000512620	NCOA3	Q9Y6Q9	1424 aa		4.08	□□□□□ -1.76
CAST-238	ENST00000512620	SHPRH	Q149N8	1683 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620	SYNJ2	O15056	1496 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620	A2M	P01023	1474 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620	MAGI2	Q86UL8	1455 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620	NPC1L1	Q9UHC9	1359 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620		A0A087WWL8	130 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620	PRRT4	C9JH25	899 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620	RAB27B	O00194	218 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620	POLRMT	O00411	1230 aa	Known RBP	4.07	□□□□□ -1.76
CAST-238	ENST00000512620	SYT5	O00445	386 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620	BCAR3	O75815	825 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620	NDST3	O95803	873 aa		4.07	□□□□□ -1.76
CAST-238	ENST00000512620	PLAT	P00750	562 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms