RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 PPP1R10Q96QC0 940 aaKnown RBP8.56□□□□□ -1.04
HTT-209ENST00000512068 PLVAPQ9BX97 442 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 HIPK3Q9H422 1215 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 GOLGA2P5Q9HBQ8 144 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 ETNK1Q9HBU6 452 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
HTT-209ENST00000512068 RGS18Q9NS28 235 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 RNF19AQ9NV58 838 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 SNX12Q9UMY4 172 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 CASTOR2A6NHX0 329 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 EFCAB8A8MWE9 144 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 MIF4GDA9UHW6 222 aaKnown RBP8.55□□□□□ -1.04
HTT-209ENST00000512068 MYO1FO00160 1098 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 CYB561D2O14569 222 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 DYNC1I1O14576 645 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 KCNK3O14649 394 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 PTGESO14684 152 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 PPEF2O14830 753 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 MGEA5O60502 916 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 POMCP01189 267 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 FAM163BP0C2L3 166 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 ODC1P11926 461 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 CAPN2P17655 700 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 GNL1P36915 607 aaPredicted RBP8.55□□□□□ -1.04
HTT-209ENST00000512068 SSR1P43307 286 aaKnown RBP8.55□□□□□ -1.04
HTT-209ENST00000512068 CTCFP49711 727 aaPredicted RBP8.55□□□□□ -1.04
HTT-209ENST00000512068 CDK7P50613 346 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 HADHBP55084 474 aaKnown RBP8.55□□□□□ -1.04
HTT-209ENST00000512068 GDF10P55107 478 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 ORC1Q13415 861 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 TUSC3Q13454 348 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 MESDQ14696 234 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 CLUL1Q15846 466 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 GOLGA7BQ2TAP0 167 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 CFAP221Q4G0U5 840 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 ODF2Q5BJF6 829 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 TEX35Q5T0J7 233 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 MEI1Q5TIA1 1274 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 DCUN1D2Q6PH85 259 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 SLC39A5Q6ZMH5 540 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 AGMOQ6ZNB7 445 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 MMS22LQ6ZRQ5 1243 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 PHF13Q86YI8 300 aaPredicted RBP8.55□□□□□ -1.04
HTT-209ENST00000512068 TMEM86AQ8N2M4 240 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 SLC4A11Q8NBS3 891 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.55□□□□□ -1.04
HTT-209ENST00000512068 CXorf38Q8TB03 319 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 STK32AQ8WU08 396 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 ARHGEF26Q96DR7 871 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 ZNF333Q96JL9 665 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 PBKQ96KB5 322 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 OSBPL9Q96SU4 736 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 MRPL45Q9BRJ2 306 aaKnown RBP8.55□□□□□ -1.04
HTT-209ENST00000512068 ELOVL4Q9GZR5 314 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 SDCBP2Q9H190 292 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 LHX5Q9H2C1 402 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 OSGEPQ9NPF4 335 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 PARVAQ9NVD7 372 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 GDAP2Q9NXN4 497 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 WDR35Q9P2L0 1181 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 RNF14Q9UBS8 474 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 SALL4Q9UJQ4 1053 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 ANAPC7Q9UJX3 599 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 DSEQ9UL01 958 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 USTQ9Y2C2 406 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 ATP11BQ9Y2G3 1177 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.55□□□□□ -1.04
HTT-209ENST00000512068 PCDHB7Q9Y5E2 793 aa8.55□□□□□ -1.04
HTT-209ENST00000512068 A0A1W2PRU2 124 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 NCK2O43639 380 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 BUB1BO60566 1050 aaPredicted RBP8.54□□□□□ -1.04
HTT-209ENST00000512068 MTA2O94776 668 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 MICAL2O94851 1124 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 SETSIPP0DME0 302 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 HSPA8P11142 646 aaKnown RBP8.54□□□□□ -1.04
HTT-209ENST00000512068 COL6A1P12109 1028 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 WARSP23381 471 aaKnown RBP8.54□□□□□ -1.04
HTT-209ENST00000512068 RRM1P23921 792 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 GTF2F1P35269 517 aaKnown RBP eCLIP8.54□□□□□ -1.041e-7■■■■■ 40.3
HTT-209ENST00000512068 SLC1A1P43005 524 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 LHX1P48742 406 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 LILRA4P59901 499 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 AMPD2Q01433 879 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 SOX4Q06945 474 aaPredicted RBP8.54□□□□□ -1.04
HTT-209ENST00000512068 PDE4CQ08493 712 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 CLN3Q13286 438 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 TCEAL1Q15170 157 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 CNGA2Q16280 664 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 SOWAHAQ2M3V2 549 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 TRIM60Q495X7 471 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 NOMO2Q5JPE7 1267 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 ZFYVE27Q5T4F4 411 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 SEL1L2Q5TEA6 688 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 TMEM164Q5U3C3 297 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 SCARA3Q6AZY7 606 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 MON1BQ7L1V2 547 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 ACOT1Q86TX2 421 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 TMEM130Q8N3G9 435 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 OLIG1Q8TAK6 271 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms