RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 ZNF358Q9NW07 568 aa9.65□□□□□ -0.86
NR1I3-230ENST00000511944 WDR35Q9P2L0 1181 aa9.65□□□□□ -0.86
NR1I3-230ENST00000511944 POLIQ9UNA4 740 aa9.65□□□□□ -0.86
NR1I3-230ENST00000511944 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.65□□□□□ -0.86
NR1I3-230ENST00000511944 SNX9Q9Y5X1 595 aa9.65□□□□□ -0.86
NR1I3-230ENST00000511944 MACROD2A1Z1Q3 448 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 MIF4GDA9UHW6 222 aaKnown RBP9.64□□□□□ -0.87
NR1I3-230ENST00000511944 M0QZQ0 153 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 O00370 1275 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 PODXLO00592 558 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 GABRDO14764 452 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 KIAA0355O15063 1070 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 CLTBP09497 229 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 CD58P19256 250 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 TYMPP19971 482 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 PCSK1P29120 753 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
NR1I3-230ENST00000511944 SCNN1AP37088 669 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 SCNN1GP51170 649 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 GUCY2FP51841 1108 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 NDST1P52848 882 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 GPNMBQ14956 572 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 WHAMMP3Q1A5X7 153 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 TRIM60Q495X7 471 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 TAF3Q5VWG9 929 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 CNKSR3Q6P9H4 555 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 DCLRE1AQ6PJP8 1040 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 SCARA5Q6ZMJ2 495 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 RTN4RL1Q86UN2 441 aaPredicted RBP9.64□□□□□ -0.87
NR1I3-230ENST00000511944 ADGRF2Q8IZF7 708 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 SIX5Q8N196 739 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 LINC01599Q8WXQ3 324 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 RPGRIP1Q96KN7 1286 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 OXCT2Q9BYC2 517 aaPredicted RBP9.64□□□□□ -0.87
NR1I3-230ENST00000511944 THAP2Q9H0W7 228 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 SDCBP2Q9H190 292 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 KLK14Q9P0G3 267 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 STXBP5LQ9Y2K9 1186 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 CAPN6Q9Y6Q1 641 aa9.64□□□□□ -0.87
NR1I3-230ENST00000511944 A0A0U1RQJ8 604 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 ABHD14A-ACY1A0A1B0GW23 586 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 ENPP3O14638 875 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 PPEF2O14830 753 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 TRAPPC3O43617 180 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 BAIAP3O94812 1187 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 ODC1P11926 461 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 SLC1A1P43005 524 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 GABRB2P47870 512 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 ATP1A2P50993 1020 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 AMPD2Q01433 879 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 ITIH3Q06033 890 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 MEI1Q5TIA1 1274 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 PLEKHA7Q6IQ23 1121 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 PALB2Q86YC2 1186 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 ZDHHC17Q8IUH5 632 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 ABI1Q8IZP0 508 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 DBF4BQ8NFT6 615 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 SLC35G2Q8TBE7 412 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 KBTBD7Q8WVZ9 684 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 ATRIPQ8WXE1 791 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 ZNF653Q96CK0 615 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 SUSD3Q96L08 255 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 TMEM175Q9BSA9 504 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 PACSIN1Q9BY11 444 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 OSBPL7Q9BZF2 842 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 ELOVL4Q9GZR5 314 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 WNT8AQ9H1J5 351 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 SNX25Q9H3E2 840 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.63□□□□□ -0.87
NR1I3-230ENST00000511944 PARVAQ9NVD7 372 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 TAS2R14Q9NYV8 317 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 HESX1Q9UBX0 185 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 TRIM10Q9UDY6 481 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 SALL4Q9UJQ4 1053 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 CDC23Q9UJX2 597 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 SNX12Q9UMY4 172 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 L1RE1Q9UN81 338 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 HYOU1Q9Y4L1 999 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 PCDHB7Q9Y5E2 793 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 MRFAP1Q9Y605 127 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 SAR1BQ9Y6B6 198 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 USP3Q9Y6I4 520 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 DUSP10Q9Y6W6 482 aa9.63□□□□□ -0.87
NR1I3-230ENST00000511944 GRID2IPA4D2P6 1211 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 MEIS3P2A8K0S8 358 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 A8MXQ7 604 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 CYB561D2O14569 222 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 FANCGO15287 622 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 MOCS3O95396 460 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 ABL1P00519 1130 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 CD19P15391 556 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 ABCB4P21439 1286 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 BRD2P25440 801 aaKnown RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 MAN1A1P33908 653 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 GNL1P36915 607 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 RPL34P49207 117 aaKnown RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 BCAT1P54687 386 aa9.62□□□□□ -0.87
NR1I3-230ENST00000511944 CKAP4Q07065 602 aaKnown RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 ELAVL2Q12926 359 aaKnown RBP9.62□□□□□ -0.87
NR1I3-230ENST00000511944 PTP4A2Q12974 167 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms