RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 ARHGEF4Q9NR80 690 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 AASDHPPTQ9NRN7 309 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 IRAK4Q9NWZ3 460 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 TUBGCP4Q9UGJ1 667 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 DERAQ9Y315 318 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 YIPF1Q9Y548 306 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 TNFRSF10AO00220 468 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 FAM102AQ5T9C2 384 aaPredicted RBP13.12□□□□□ -0.31
LIN54-210ENST00000510877 DNAJB7Q7Z6W7 309 aaPredicted RBP13.12□□□□□ -0.31
LIN54-210ENST00000510877 DAAM2Q86T65 1068 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.12□□□□□ -0.31
LIN54-210ENST00000510877 LRRC52Q8N7C0 313 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 PARD3BQ8TEW8 1205 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 FZD8Q9H461 694 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 CLSTN2Q9H4D0 955 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 KAT6AQ92794 2004 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 PRRC2BQ5JSZ5 2229 aaKnown RBP13.11□□□□□ -0.31
LIN54-210ENST00000510877 ATP8B1O43520 1251 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 TYMPP19971 482 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 ORC1Q13415 861 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 KRT33BQ14525 404 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 SYCP2LQ5T4T6 812 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 PRKD2Q9BZL6 878 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 SORCS3Q9UPU3 1222 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 E7EVH7 732 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 SRGAP2O75044 1071 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
LIN54-210ENST00000510877 ASGR2P07307 311 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 BCAT1P54687 386 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 CCDC6Q16204 474 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 USP39Q53GS9 565 aaKnown RBP13.11□□□□□ -0.31
LIN54-210ENST00000510877 EFHBQ8N7U6 833 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 UBA3Q8TBC4 463 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 ZNF653Q96CK0 615 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 ASIC4Q96FT7 647 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 ZDHHC7Q9NXF8 308 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 SPATA31C1P0DKV0 1188 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 POLR2EP19388 210 aaKnown RBP13.11□□□□□ -0.31
LIN54-210ENST00000510877 ROR1Q01973 937 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 TYRO3Q06418 890 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 KCNH2Q12809 1159 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 SH2D4BQ5SQS7 431 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 NUP93Q8N1F7 819 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 SPATA18Q8TC71 538 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 OMDQ99983 421 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 CFAP97Q9P2B7 532 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 SLC4A1P02730 911 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 GJA1P17302 382 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 CYP3A5P20815 502 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 C2orf27AQ580R0 203 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 CCNYQ8ND76 341 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 ZSCAN18Q8TBC5 510 aaPredicted RBP13.11□□□□□ -0.31
LIN54-210ENST00000510877 C2orf15Q8WU43 125 aaKnown RBP13.11□□□□□ -0.31
LIN54-210ENST00000510877 TRIM11Q96F44 468 aa13.11□□□□□ -0.31
LIN54-210ENST00000510877 BAZ2AQ9UIF9 1905 aaKnown RBP13.1□□□□□ -0.31
LIN54-210ENST00000510877 RHOP08100 348 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 CYP24A1Q07973 514 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 DMWDQ09019 674 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 EFHC2Q5JST6 749 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 C9orf57Q5W0N0 161 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 AGMOQ6ZNB7 445 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 DNAJC12Q9UKB3 198 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 MYO1FO00160 1098 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 TNFSF9P41273 254 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 NRLP54845 237 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 AASDHQ4L235 1098 aaPredicted RBP13.1□□□□□ -0.31
LIN54-210ENST00000510877 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 NAT16Q8N8M0 369 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 RBBP8NLQ8NC74 664 aaPredicted RBP13.1□□□□□ -0.31
LIN54-210ENST00000510877 MYLPFQ96A32 169 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 MINDY3Q9H8M7 445 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 CDH7Q9ULB5 785 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 ITIH6Q6UXX5 1313 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 ZDBF2Q9HCK1 2354 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 FAM170BA6NMN3 283 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 PCDH8O95206 1070 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 CXCL10P02778 98 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 FERP16591 822 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 SPATA1Q5VX52 437 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 GRAMD4Q6IC98 578 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 CELF5Q8N6W0 485 aaKnown RBP13.1□□□□□ -0.31
LIN54-210ENST00000510877 TMEM40Q8WWA1 233 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 FGD4Q96M96 766 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 GKN1Q9NS71 199 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 ADAM22Q9P0K1 906 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 INSL5Q9Y5Q6 135 aa13.1□□□□□ -0.31
LIN54-210ENST00000510877 ZFP37Q9Y6Q3 630 aaPredicted RBP13.1□□□□□ -0.31
LIN54-210ENST00000510877 SLC38A8A6NNN8 435 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 ITPRIPL2Q3MIP1 535 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 EFHC1Q5JVL4 640 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 UBALD2Q8IYN6 164 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 SLC2A14Q8TDB8 520 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 MKNK1Q9BUB5 465 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 AKAP7Q9P0M2 348 aaPredicted RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 MARCH2Q9P0N8 246 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 SEPT10Q9P0V9 454 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 WDR35Q9P2L0 1181 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 DNMT3LQ9UJW3 386 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms