RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 TRIM75PA6NK02 468 aa8.47□□□□□ -1.05
USP53-206ENST00000510737 RPS7P62081 194 aaKnown RBP8.47□□□□□ -1.05
USP53-206ENST00000510737 FPGSQ05932 587 aa8.47□□□□□ -1.05
USP53-206ENST00000510737 DYRK1AQ13627 763 aa8.47□□□□□ -1.05
USP53-206ENST00000510737 PABPC1LQ4VXU2 614 aaKnown RBP8.47□□□□□ -1.05
USP53-206ENST00000510737 TSTD2Q5T7W7 516 aa8.47□□□□□ -1.05
USP53-206ENST00000510737 NPM2Q86SE8 214 aaKnown RBP8.47□□□□□ -1.05
USP53-206ENST00000510737 ADGRG5Q8IZF4 528 aa8.47□□□□□ -1.05
USP53-206ENST00000510737 ZCRB1Q8TBF4 217 aaKnown RBP8.47□□□□□ -1.05
USP53-206ENST00000510737 SCARB1Q8WTV0 552 aa8.47□□□□□ -1.05
USP53-206ENST00000510737 NFAT5O94916 1531 aa8.47□□□□□ -1.05
USP53-206ENST00000510737 KIF13BQ9NQT8 1826 aa8.47□□□□□ -1.05
USP53-206ENST00000510737 MANSC4A6NHS7 340 aaPredicted RBP8.46□□□□□ -1.06
USP53-206ENST00000510737 CHRM2P08172 466 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 PPP3CBP16298 524 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 INAVAQ3KP66 663 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 RNF219Q5W0B1 726 aaPredicted RBP8.46□□□□□ -1.06
USP53-206ENST00000510737 GRASPQ7Z6J2 395 aaPredicted RBP8.46□□□□□ -1.06
USP53-206ENST00000510737 AMIGO2Q86SJ2 522 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 CBARPQ8N350 705 aaPredicted RBP8.46□□□□□ -1.06
USP53-206ENST00000510737 IL17RDQ8NFM7 739 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 TOR1AIP2Q8NFQ8 470 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 JADE3Q92613 823 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 KMT5AQ9NQR1 393 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 JKAMPQ9P055 326 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 WASHC2AQ641Q2 1341 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 CNTNAP1P78357 1384 aa8.46□□□□□ -1.06
USP53-206ENST00000510737 BRCA1P38398 1863 aaKnown RBP8.45□□□□□ -1.06
USP53-206ENST00000510737 WDR27A2RRH5 827 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 LINC00473A8K010 186 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 SLC43A1O75387 559 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 EDNRBP24530 442 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 HMGB2P26583 209 aaKnown RBP8.45□□□□□ -1.06
USP53-206ENST00000510737 CDC42EP1Q00587 391 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 PTPRRQ15256 657 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 EPHA10Q5JZY3 1008 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 LCE1AQ5T7P2 110 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 CFAP52Q8N1V2 620 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 DMRTA2Q96SC8 542 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 C1QTNF7Q9BXJ2 289 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 TDP1Q9NUW8 608 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 IPPQ9Y573 584 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 AOX1Q06278 1338 aa8.45□□□□□ -1.06
USP53-206ENST00000510737 N4BP2Q86UW6 1770 aaPredicted RBP8.45□□□□□ -1.06
USP53-206ENST00000510737 NDUFS2O75306 463 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 MTHFD1P11586 935 aaKnown RBP8.44□□□□□ -1.06
USP53-206ENST00000510737 CPEP16870 476 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 GPD1P21695 349 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 C5AR1P21730 350 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 CNGA1P29973 690 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 ANXA11P50995 505 aaKnown RBP8.44□□□□□ -1.06
USP53-206ENST00000510737 IL10RAQ13651 578 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 RSPH3Q86UC2 560 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 LTV1Q96GA3 475 aaPredicted RBP8.44□□□□□ -1.06
USP53-206ENST00000510737 MRGPRX4Q96LA9 322 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 SLC29A3Q9BZD2 475 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 ST3GAL5Q9UNP4 418 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 LIMCH1Q9UPQ0 1083 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 PALLDQ8WX93 1383 aa8.44□□□□□ -1.06
USP53-206ENST00000510737 CCDC151A5D8V7 595 aa8.43□□□□□ -1.06
USP53-206ENST00000510737 KRTAP29-1A8MX34 341 aaPredicted RBP8.43□□□□□ -1.06
USP53-206ENST00000510737 E9PLN8 166 aa8.43□□□□□ -1.06
USP53-206ENST00000510737 ATP2B3Q16720 1220 aa8.43□□□□□ -1.06
USP53-206ENST00000510737 C3orf36Q3SXR2 165 aa8.43□□□□□ -1.06
USP53-206ENST00000510737 ZNF365Q70YC5 407 aa8.43□□□□□ -1.06
USP53-206ENST00000510737 PDPRQ8NCN5 879 aa8.43□□□□□ -1.06
USP53-206ENST00000510737 PGBD1Q96JS3 809 aa8.43□□□□□ -1.06
USP53-206ENST00000510737 VKORC1Q9BQB6 163 aa8.43□□□□□ -1.06
USP53-206ENST00000510737 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.43□□□□□ -1.06
USP53-206ENST00000510737 TTC21AQ8NDW8 1320 aa8.43□□□□□ -1.06
USP53-206ENST00000510737 CD1AP06126 327 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 IARSP41252 1262 aaKnown RBP8.42□□□□□ -1.06
USP53-206ENST00000510737 ZNF81P51508 661 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 TMF1P82094 1093 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 ZNF844Q08AG5 666 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 CLUL1Q15846 466 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 AMOTL1Q8IY63 956 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 CNTD1Q8N815 330 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 SMG7Q92540 1137 aaKnown RBP8.42□□□□□ -1.06
USP53-206ENST00000510737 IP6K1Q92551 441 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 IMPG2Q9BZV3 1241 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 NSD3Q9BZ95 1437 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 TAF1LQ8IZX4 1826 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 ARFGEF1Q9Y6D6 1849 aa8.42□□□□□ -1.06
USP53-206ENST00000510737 VIRMAQ69YN4 1812 aaKnown RBP8.41□□□□□ -1.06
USP53-206ENST00000510737 C4BP0C0L5 1744 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 PASKQ96RG2 1323 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 CCDC195A0A1B0GUA6 201 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 HTRA2O43464 458 aaPredicted RBP8.41□□□□□ -1.06
USP53-206ENST00000510737 PCDHGA12O60330 932 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 CELA2AP08217 269 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 CHRNA5P30532 468 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 EXOSC10Q01780 885 aaKnown RBP8.41□□□□□ -1.06
USP53-206ENST00000510737 ITPK1Q13572 414 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.41□□□□□ -1.061e-6■■■□□ 17.5
USP53-206ENST00000510737 ATL2Q8NHH9 583 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 PACSIN1Q9BY11 444 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 PCDHB1Q9Y5F3 818 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 PCDHGA9Q9Y5G4 932 aaKnown RBP8.41□□□□□ -1.06
USP53-206ENST00000510737 PCDHGA8Q9Y5G5 932 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms