RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PNPLA4P41247 253 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 PDGFRLQ15198 375 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 CFAP221Q4G0U5 840 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 STPG1Q5TH74 334 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 SV2BQ7L1I2 683 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 SCN4BQ8IWT1 228 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 ADGRF2Q8IZF7 708 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 TTC16Q8NEE8 873 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 LOXL4Q96JB6 756 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 RNF38Q9H0F5 515 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 INTS13Q9NVM9 706 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 DUS2Q9NX74 493 aaKnown RBP17.07■□□□□ 0.32
RAB40C-202ENST00000509637 SLC8A2Q9UPR5 921 aa17.07■□□□□ 0.32
RAB40C-202ENST00000509637 SCAMP3O14828 347 aaKnown RBP17.06■□□□□ 0.32
RAB40C-202ENST00000509637 KRT19P08727 400 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 IDEP14735 1019 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 DRD1P21728 446 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 BDNFP23560 247 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 ABCD1P33897 745 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 RPL10AP62906 217 aaKnown RBP17.06■□□□□ 0.32
RAB40C-202ENST00000509637 RBP5P82980 135 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 DMC1Q14565 340 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 AASDHQ4L235 1098 aaPredicted RBP17.06■□□□□ 0.32
RAB40C-202ENST00000509637 SYT13Q7L8C5 426 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 TMEM86AQ8N2M4 240 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 TOP6BLQ8N6T0 577 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 CD101Q93033 1021 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 MYLPFQ96A32 169 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 MRPL45Q9BRJ2 306 aaKnown RBP17.06■□□□□ 0.32
RAB40C-202ENST00000509637 PANK4Q9NVE7 773 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 ZMYM5Q9UJ78 669 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 ITGA11Q9UKX5 1188 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
RAB40C-202ENST00000509637 USP24Q9UPU5 2620 aa17.06■□□□□ 0.32
RAB40C-202ENST00000509637 NUP205Q92621 2012 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 GIPC1O14908 333 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 PDGFRBP09619 1106 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 CCDC192P0DO97 292 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 SYT1P21579 422 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 BCKDHBP21953 392 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 KCNA4P22459 653 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 MPLP40238 635 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 MAGEA11P43364 429 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 SLC6A11P48066 632 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 SPATA2LQ8IUW3 424 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-202ENST00000509637 CAMKK1Q8N5S9 505 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 USP33Q8TEY7 942 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 NOC3LQ8WTT2 800 aaKnown RBP17.05■□□□□ 0.32
RAB40C-202ENST00000509637 ZNF516Q92618 1163 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 SYT15Q9BQS2 421 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 TMEM206Q9H813 350 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 CCDC39Q9UFE4 941 aa17.05■□□□□ 0.32
RAB40C-202ENST00000509637 HELZP42694 1942 aaKnown RBP17.05■□□□□ 0.32
RAB40C-202ENST00000509637 TRAV19A0A0A6YYK7 116 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 TGFB1I1O43294 461 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 ATG13O75143 517 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 USP17L7P0C7H9 530 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 TCF3P15923 654 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 HDCP19113 662 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 MYL7Q01449 175 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 SLC39A14Q15043 492 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 E2F4Q16254 413 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 ST3GAL2Q16842 350 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 EMC10Q5UCC4 262 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 CC2D1AQ6P1N0 951 aaPredicted RBP17.04■□□□□ 0.32
RAB40C-202ENST00000509637 TMEM92Q6UXU6 159 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 C12orf40Q86WS4 652 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 SYCP3Q8IZU3 236 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 GPD1LQ8N335 351 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 PDILTQ8N807 584 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 FRMD1Q8N878 549 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 CACTINQ8WUQ7 758 aaKnown RBP17.04■□□□□ 0.32
RAB40C-202ENST00000509637 ELMO3Q96BJ8 720 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 HPDLQ96IR7 371 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 LSM14BQ9BX40 385 aaKnown RBP17.04■□□□□ 0.32
RAB40C-202ENST00000509637 EBF1Q9UH73 591 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 ARHGAP26Q9UNA1 814 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 EXOC7Q9UPT5 735 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 MTMR6Q9Y217 621 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 PCDHB13Q9Y5F0 798 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 GON4LQ3T8J9 2241 aa17.04■□□□□ 0.32
RAB40C-202ENST00000509637 LAMA1P25391 3075 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 MYO18AQ92614 2054 aaKnown RBP17.03■□□□□ 0.32
RAB40C-202ENST00000509637 THADAQ6YHU6 1953 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 BCLAF3A2AJT9 711 aaKnown RBP17.03■□□□□ 0.32
RAB40C-202ENST00000509637 PATE3B3GLJ2 98 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 AKAP3O75969 853 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 LDHAP00338 332 aaKnown RBP17.03■□□□□ 0.32
RAB40C-202ENST00000509637 CKMP06732 381 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 IFNAR2P48551 515 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 LHX1P48742 406 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 CPA6Q8N4T0 437 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 SPATA18Q8TC71 538 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 WBP2Q969T9 261 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 PCED1BQ96HM7 432 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 FUBP3Q96I24 572 aaKnown RBP eCLIP17.03■□□□□ 0.32
RAB40C-202ENST00000509637 SPATA17Q96L03 361 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 TTLL2Q9BWV7 592 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 TPSD1Q9BZJ3 242 aa17.03■□□□□ 0.32
RAB40C-202ENST00000509637 DPEP3Q9H4B8 488 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms