RNA–Protein interactions for RNA: ENST00000509632.5

SDHA-212, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-212ENST00000509632 OR6B3Q8NGW1 331 aa23.16■■□□□ 1.3
SDHA-212ENST00000509632 GZF1Q9H116 711 aaPredicted RBP23.16■■□□□ 1.3
SDHA-212ENST00000509632 KIF9Q9HAQ2 790 aa23.16■■□□□ 1.3
SDHA-212ENST00000509632 HPS4Q9NQG7 708 aa23.16■■□□□ 1.3
SDHA-212ENST00000509632 NCDNQ9UBB6 729 aa23.16■■□□□ 1.3
SDHA-212ENST00000509632 ZNF292O60281 2723 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 ACTN4O43707 911 aaKnown RBP23.15■■□□□ 1.3
SDHA-212ENST00000509632 PHACTR2O75167 634 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 TACC1O75410 805 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 TADA3O75528 432 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 FAM163BP0C2L3 166 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 CMA1P23946 247 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 MYL6P60660 151 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 TNNC1P63316 161 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 KMT5BQ4FZB7 885 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 Q6ZS52 159 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 FSIP1Q8NA03 581 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 MYCBPAPQ8TBZ2 947 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 PCED1BQ96HM7 432 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 SPATA17Q96L03 361 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 SLC22A12Q96S37 553 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 EPC1Q9H2F5 836 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 EXOC1Q9NV70 894 aa23.15■■□□□ 1.3
SDHA-212ENST00000509632 NXF1Q9UBU9 619 aaKnown RBP23.15■■□□□ 1.3
SDHA-212ENST00000509632 NUP210Q8TEM1 1887 aaPredicted RBP23.14■■□□□ 1.29
SDHA-212ENST00000509632 TRAV19A0A0A6YYK7 116 aa23.14■■□□□ 1.29
SDHA-212ENST00000509632 OTOL1A6NHN0 477 aaPredicted RBP23.14■■□□□ 1.29
SDHA-212ENST00000509632 USP17L7P0C7H9 530 aa23.14■■□□□ 1.29
SDHA-212ENST00000509632 PFKFB1P16118 471 aa23.14■■□□□ 1.29
SDHA-212ENST00000509632 CASP4P49662 377 aa23.14■■□□□ 1.29
SDHA-212ENST00000509632 PSMD2Q13200 908 aa23.14■■□□□ 1.29
SDHA-212ENST00000509632 ZNF268Q14587 947 aaPredicted RBP23.14■■□□□ 1.29
SDHA-212ENST00000509632 MDH1BQ5I0G3 518 aa23.14■■□□□ 1.29
SDHA-212ENST00000509632 RIN3Q8TB24 985 aa23.14■■□□□ 1.29
SDHA-212ENST00000509632 GOLGA5Q8TBA6 731 aa23.14■■□□□ 1.29
SDHA-212ENST00000509632 CHAMP1Q96JM3 812 aa23.14■■□□□ 1.29
SDHA-212ENST00000509632 SMG5Q9UPR3 1016 aaKnown RBP23.14■■□□□ 1.29
SDHA-212ENST00000509632 NME7Q9Y5B8 376 aa23.14■■□□□ 1.29
SDHA-212ENST00000509632 ARSAP15289 507 aa23.13■■□□□ 1.29
SDHA-212ENST00000509632 PTPN1P18031 435 aaKnown RBP23.13■■□□□ 1.29
SDHA-212ENST00000509632 ANXA13P27216 316 aa23.13■■□□□ 1.29
SDHA-212ENST00000509632 ATICP31939 592 aa23.13■■□□□ 1.29
SDHA-212ENST00000509632 FAM160A1Q05DH4 1040 aa23.13■■□□□ 1.29
SDHA-212ENST00000509632 CCINQ13939 588 aa23.13■■□□□ 1.29
SDHA-212ENST00000509632 SYNPOQ8N3V7 929 aa23.13■■□□□ 1.29
SDHA-212ENST00000509632 ARL14EPQ8N8R7 260 aaPredicted RBP23.13■■□□□ 1.29
SDHA-212ENST00000509632 PLEKHO2Q8TD55 490 aa23.13■■□□□ 1.29
SDHA-212ENST00000509632 SECISBP2LQ93073 1101 aaKnown RBP23.13■■□□□ 1.29
SDHA-212ENST00000509632 SPATA32Q96LK8 384 aa23.13■■□□□ 1.29
SDHA-212ENST00000509632 ZDHHC9Q9Y397 364 aa23.13■■□□□ 1.29
SDHA-212ENST00000509632 C2orf78A6NCI8 922 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 A8MXQ7 604 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 CKMP06732 381 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 HDCP19113 662 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 DMWDQ09019 674 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 PDGFRLQ15198 375 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 DENND5BQ6ZUT9 1274 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 KIAA0895Q8NCT3 520 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 PARD3BQ8TEW8 1205 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 SYAP1Q96A49 352 aaPredicted RBP23.12■■□□□ 1.29
SDHA-212ENST00000509632 XYLT2Q9H1B5 865 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 DPEP3Q9H4B8 488 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 DMAC2Q9NW81 257 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 C2orf42Q9NWW7 574 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 GCNT4Q9P109 453 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 USP25Q9UHP3 1055 aa23.12■■□□□ 1.29
SDHA-212ENST00000509632 ZNF638Q14966 1978 aaKnown RBP23.11■■□□□ 1.29
SDHA-212ENST00000509632 CHURC1-FNTBB4DL54 471 aa23.11■■□□□ 1.29
SDHA-212ENST00000509632 STAU1O95793 577 aaKnown RBP23.11■■□□□ 1.29
SDHA-212ENST00000509632 FNTBP49356 437 aa23.11■■□□□ 1.29
SDHA-212ENST00000509632 USP46P62068 366 aa23.11■■□□□ 1.29
SDHA-212ENST00000509632 AMPD2Q01433 879 aa23.11■■□□□ 1.29
SDHA-212ENST00000509632 GRSF1Q12849 480 aaKnown RBP eCLIP23.11■■□□□ 1.29
SDHA-212ENST00000509632 BIRC3Q13489 604 aa23.11■■□□□ 1.29
SDHA-212ENST00000509632 MTF1Q14872 753 aa23.11■■□□□ 1.29
SDHA-212ENST00000509632 HEATR6Q6AI08 1181 aaKnown RBP23.11■■□□□ 1.29
SDHA-212ENST00000509632 RMDN1Q96DB5 314 aa23.11■■□□□ 1.29
SDHA-212ENST00000509632 CEP295NLQ96MC4 621 aa23.11■■□□□ 1.29
SDHA-212ENST00000509632 DUS2Q9NX74 493 aaKnown RBP23.11■■□□□ 1.29
SDHA-212ENST00000509632 DENND4CQ5VZ89 1909 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 LRRIQ3A6PVS8 624 aaPredicted RBP23.1■■□□□ 1.29
SDHA-212ENST00000509632 F8VP50 259 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 K7ESF4 209 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 TRDMT1O14717 391 aaKnown RBP23.1■■□□□ 1.29
SDHA-212ENST00000509632 TRIM66O15016 1216 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 CLSTN1O94985 981 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 GALK1P51570 392 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 AP3M2P53677 418 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 CDH8P55286 799 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 KRT85P78386 507 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 KCNB1Q14721 858 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 LPAL2Q16609 132 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 TMEM196Q5HYL7 178 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 TDRD10Q5VZ19 366 aaKnown RBP23.1■■□□□ 1.29
SDHA-212ENST00000509632 FSTL4Q6MZW2 842 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 C8orf48Q96LL4 319 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 KCTD10Q9H3F6 313 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 TRPM5Q9NZQ8 1165 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 RAB23Q9ULC3 237 aa23.1■■□□□ 1.29
SDHA-212ENST00000509632 HPSEQ9Y251 543 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms