RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 MEI4A8MW99 385 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 TMEM189-UBE2V1I3L0A0 370 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 CDK2AP1O14519 115 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 SYN3O14994 580 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 TBX3O15119 743 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 MSH4O15457 936 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 CBFA2T3O75081 653 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 ZNF217O75362 1048 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 PRAMEF12O95522 483 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 CDK4P11802 303 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 KRT10P13645 584 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 LIG1P18858 919 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 RXRAP19793 462 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 MPSTP25325 297 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 MCM4P33991 863 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 PTGIRP43119 386 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 SMCPP49901 116 aaPredicted RBP4.21□□□□□ -1.74
RNF4-211ENST00000509206 USP11P51784 963 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 YARSP54577 528 aaKnown RBP4.21□□□□□ -1.74
RNF4-211ENST00000509206 NPEPPSP55786 919 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 WDR4P57081 412 aaKnown RBP4.21□□□□□ -1.74
RNF4-211ENST00000509206 CYP4F8P98187 520 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 CENPCQ03188 943 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 TLE3Q04726 772 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 GRIK2Q13002 908 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 DUSP4Q13115 394 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 TARDBPQ13148 414 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNF4-211ENST00000509206 CLN3Q13286 438 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 EMC2Q15006 297 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 SMAD1Q15797 465 aaKnown RBP4.21□□□□□ -1.74
RNF4-211ENST00000509206 INF2Q27J81 1249 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 INAVAQ3KP66 663 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 XKR9Q5GH70 373 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 GLRA4Q5JXX5 417 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 PEAR1Q5VY43 1037 aaPredicted RBP4.21□□□□□ -1.74
RNF4-211ENST00000509206 SDE2Q6IQ49 451 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 ARMCX5Q6P1M9 558 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 PCSK4Q6UW60 755 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 Q6ZVU0 165 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 APBB1IPQ7Z5R6 666 aaPredicted RBP4.21□□□□□ -1.74
RNF4-211ENST00000509206 USP37Q86T82 979 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 RAB11FIP4Q86YS3 637 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 ZBTB8OSQ8IWT0 167 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 CMTM8Q8IZV2 173 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 ALLCQ8N6M5 410 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 MAB21L3Q8N8X9 362 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 ZNF248Q8NDW4 579 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 OLIG1Q8TAK6 271 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 USP33Q8TEY7 942 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 CCDC12Q8WUD4 166 aaPredicted RBP4.21□□□□□ -1.74
RNF4-211ENST00000509206 ATP2A3Q93084 1043 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 ITPKCQ96DU7 683 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 LIN37Q96GY3 246 aaPredicted RBP4.21□□□□□ -1.74
RNF4-211ENST00000509206 CCDC136Q96JN2 1154 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 DRC1Q96MC2 740 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 PGLYRP2Q96PD5 576 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 NRSN2Q9GZP1 204 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 SAP130Q9H0E3 1048 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 ECT2Q9H8V3 914 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 KIF9Q9HAQ2 790 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 CPNE5Q9HCH3 593 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 LRRC4CQ9HCJ2 640 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 GPRC5CQ9NQ84 441 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 HPS4Q9NQG7 708 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 YIPF1Q9Y548 306 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 PPME1Q9Y570 386 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 HRH3Q9Y5N1 445 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 USP3Q9Y6I4 520 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 CFAP46Q8IYW2 2715 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 WDR81Q562E7 1941 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 DOPEY2Q9Y3R5 2298 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 PDCD11Q14690 1871 aaKnown RBP4.2□□□□□ -1.74
RNF4-211ENST00000509206 SERTM1A2A2V5 107 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 OTOL1A6NHN0 477 aaPredicted RBP4.2□□□□□ -1.74
RNF4-211ENST00000509206 hCG_1984214I3L0E3 225 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 MEN1O00255 615 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 PODXLO00592 558 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 PTGESO14684 152 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 N4BP3O15049 544 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 KLK10O43240 276 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 B4GALT5O43286 388 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 CILPO75339 1184 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 GJB3O75712 270 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 RECQL4O94761 1208 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 AFPP02771 609 aaKnown RBP4.2□□□□□ -1.74
RNF4-211ENST00000509206 APODP05090 189 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 ZNF883P0CG24 379 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 MAOBP27338 520 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 GNA11P29992 359 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 QARSP47897 775 aaKnown RBP4.2□□□□□ -1.74
RNF4-211ENST00000509206 PDE1AP54750 535 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 RELBQ01201 579 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 MBTD1Q05BQ5 628 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 SF3A1Q15459 793 aaKnown RBP4.2□□□□□ -1.74
RNF4-211ENST00000509206 TEAD4Q15561 434 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 UPP1Q16831 310 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 HLA-BQ31612 363 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 HSF5Q4G112 596 aaPredicted RBP4.2□□□□□ -1.74
RNF4-211ENST00000509206 COX20Q5RI15 118 aa4.2□□□□□ -1.74
RNF4-211ENST00000509206 ANO5Q75V66 913 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms