RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 TFAP2BQ92481 460 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 PPP2R3CQ969Q6 453 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 SMARCD1Q96GM5 515 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 B3GALT6Q96L58 329 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
USP46-207ENST00000508499 KLHL5Q96PQ7 755 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 TTYH1Q9H313 450 aaPredicted RBP9.16□□□□□ -0.94
USP46-207ENST00000508499 DPEP3Q9H4B8 488 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 PLEKHA4Q9H4M7 779 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.16□□□□□ -0.94
USP46-207ENST00000508499 ENTPD7Q9NQZ7 604 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 ZNHIT6Q9NWK9 470 aaKnown RBP9.16□□□□□ -0.94
USP46-207ENST00000508499 ARHGAP20Q9P2F6 1191 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 GTF3C4Q9UKN8 822 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 TRIOBPQ9H2D6 2365 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 MYO16Q9Y6X6 1858 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.15□□□□□ -0.94
USP46-207ENST00000508499 MTMR11A4FU01 709 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 EPOPA6NHQ4 379 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 ATP2C2O75185 946 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 CLSTN1O94985 981 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 VNN2O95498 520 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 PDGFRBP09619 1106 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 UNGP13051 313 aaPredicted RBP9.15□□□□□ -0.94
USP46-207ENST00000508499 CHRNB2P17787 502 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 OR1D2P34982 312 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 PLA2G4AP47712 749 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 TUFMP49411 452 aaKnown RBP9.15□□□□□ -0.94
USP46-207ENST00000508499 CLCN4P51793 760 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 ADKP55263 362 aaKnown RBP9.15□□□□□ -0.94
USP46-207ENST00000508499 GSCP56915 257 aaPredicted RBP9.15□□□□□ -0.94
USP46-207ENST00000508499 FMO1Q01740 532 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 KLHL30Q0D2K2 578 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 ASIC2Q16515 512 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 DUSP6Q16828 381 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 ZNF394Q53GI3 561 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
USP46-207ENST00000508499 CYP26C1Q6V0L0 522 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 VPS36Q86VN1 386 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 C12orf29Q8N999 325 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 SLC35F5Q8WV83 523 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 CPLX3Q8WVH0 158 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 KCTD13Q8WZ19 329 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 KCTD12Q96CX2 325 aaKnown RBP9.15□□□□□ -0.94
USP46-207ENST00000508499 VCPIP1Q96JH7 1222 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 SPATA17Q96L03 361 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 C8orf48Q96LL4 319 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 DUSP16Q9BY84 665 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 B3GNT5Q9BYG0 378 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 HAUS4Q9H6D7 363 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 COMMD8Q9NX08 183 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 FBXW11Q9UKB1 542 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 TSPAN16Q9UKR8 245 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 NENFQ9UMX5 172 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 PCDHB5Q9Y5E4 795 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 ANAPC1Q9H1A4 1944 aa9.15□□□□□ -0.94
USP46-207ENST00000508499 FAM92AA1XBS5 289 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 HIDE1A8MVS5 230 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 XPO1O14980 1071 aaKnown RBP9.14□□□□□ -0.95
USP46-207ENST00000508499 TRIM66O15016 1216 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 ADAM12O43184 909 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 HCRTO43612 131 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 NCK2O43639 380 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 PNMA6AP0CW24 399 aaPredicted RBP9.14□□□□□ -0.95
USP46-207ENST00000508499 CPB1P15086 417 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 NPR3P17342 541 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 ACAT1P24752 427 aaKnown RBP9.14□□□□□ -0.95
USP46-207ENST00000508499 IRS1P35568 1242 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 USP8P40818 1118 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 GPD2P43304 727 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 SLC8A3P57103 927 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 PSMC1P62191 440 aaKnown RBP9.14□□□□□ -0.95
USP46-207ENST00000508499 CENPCQ03188 943 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 BST2Q10589 180 aaKnown RBP9.14□□□□□ -0.95
USP46-207ENST00000508499 SLC18A3Q16572 532 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 SLC39A12Q504Y0 691 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 MDH1BQ5I0G3 518 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 RAB41Q5JT25 222 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 C10orf76Q5T2E6 689 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 ZNF697Q5TEC3 545 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 ELMSAN1Q6PJG2 1045 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 RNF19BQ6ZMZ0 732 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 CLEC20AQ6ZU45 233 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 ZNF571Q7Z3V5 609 aaPredicted RBP9.14□□□□□ -0.95
USP46-207ENST00000508499 FAM35AQ86V20 835 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 TTC30AQ86WT1 665 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 SPATA2LQ8IUW3 424 aaPredicted RBP9.14□□□□□ -0.95
USP46-207ENST00000508499 LRRC8AQ8IWT6 810 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 SLC2A14Q8TDB8 520 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 SLC22A17Q8WUG5 538 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 MYLPFQ96A32 169 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 HSFY1Q96LI6 401 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 TMEM209Q96SK2 561 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 AGPAT1Q99943 283 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 ISCUQ9H1K1 167 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 NSUN3Q9H649 340 aaKnown RBP9.14□□□□□ -0.95
USP46-207ENST00000508499 DMAP1Q9NPF5 467 aaPredicted RBP9.14□□□□□ -0.95
USP46-207ENST00000508499 TMLHEQ9NVH6 421 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 IL37Q9NZH6 218 aa9.14□□□□□ -0.95
USP46-207ENST00000508499 HESX1Q9UBX0 185 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms