RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PHACTR2O75167 634 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 TACC1O75410 805 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 NR3C1P04150 777 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 MYL1P05976 194 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 CHRNB1P11230 501 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 DDX6P26196 483 aaKnown RBP eCLIP15.25■□□□□ 0.038e-8■■□□□ 14.5
RAB28-205ENST00000508274 GNL1P36915 607 aaPredicted RBP15.25■□□□□ 0.03
RAB28-205ENST00000508274 DPYDQ12882 1025 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 BIRC3Q13489 604 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 GAS6Q14393 721 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 TRIM68Q6AZZ1 485 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 ZC3H14Q6PJT7 736 aaKnown RBP15.25■□□□□ 0.03
RAB28-205ENST00000508274 MON1AQ86VX9 555 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 SLC9A9Q8IVB4 645 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 SCAND2PQ9GZW5 306 aaPredicted RBP15.25■□□□□ 0.03
RAB28-205ENST00000508274 SNX25Q9H3E2 840 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 TRPC7Q9HCX4 862 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 PRMT8Q9NR22 394 aaPredicted RBP15.25■□□□□ 0.03
RAB28-205ENST00000508274 TDP1Q9NUW8 608 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 UXTQ9UBK9 157 aaPredicted RBP15.25■□□□□ 0.03
RAB28-205ENST00000508274 MAPK8IP1Q9UQF2 711 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 ZNF292O60281 2723 aa15.25■□□□□ 0.03
RAB28-205ENST00000508274 OTOGLQ3ZCN5 2332 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 PDXKO00764 312 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 RHOBTB3O94955 611 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 CLSTN1O94985 981 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 VNN1O95497 513 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 STAU1O95793 577 aaKnown RBP15.24■□□□□ 0.03
RAB28-205ENST00000508274 LMNAP02545 664 aaKnown RBP15.24■□□□□ 0.03
RAB28-205ENST00000508274 GRIK1P39086 918 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 RAP1GAPP47736 663 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 CACNA2D1P54289 1103 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 USP46P62068 366 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 CEP135Q66GS9 1140 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 SCARA5Q6ZMJ2 495 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 KRBA2Q6ZNG9 492 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 MYCBPAPQ8TBZ2 947 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 SYAP1Q96A49 352 aaPredicted RBP15.24■□□□□ 0.03
RAB28-205ENST00000508274 C8orf33Q9H7E9 229 aaPredicted RBP15.24■□□□□ 0.03
RAB28-205ENST00000508274 GKN1Q9NS71 199 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 TMEM30AQ9NV96 361 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 ATP6V1DQ9Y5K8 247 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 GPR179Q6PRD1 2367 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 ATG2BQ96BY7 2078 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 SPTBN4Q9H254 2564 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 A0A1W2PQ27 194 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 A0A1W2PQ64 194 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 A0A1W2PQD8 194 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 C2orf78A6NCI8 922 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 OTOL1A6NHN0 477 aaPredicted RBP15.24■□□□□ 0.03
RAB28-205ENST00000508274 F8VP50 259 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 CLDN5O00501 218 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 C4BPAP04003 597 aaKnown RBP15.24■□□□□ 0.03
RAB28-205ENST00000508274 ATICP31939 592 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 MLLT6P55198 1093 aaPredicted RBP15.24■□□□□ 0.03
RAB28-205ENST00000508274 CDH8P55286 799 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 CLDN10P78369 228 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 PLCB2Q00722 1185 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 NCOA4Q13772 614 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 PON2Q15165 354 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 MAPRE1Q15691 268 aaKnown RBP15.24■□□□□ 0.03
RAB28-205ENST00000508274 ZNF699Q32M78 642 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 ZNF528Q3MIS6 628 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 VSTM1Q6UX27 236 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 Q6ZS52 159 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 TTC16Q8NEE8 873 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 MSANTD3Q96H12 275 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 CYP2S1Q96SQ9 504 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 FAM83CQ9BQN1 747 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 ZNF518BQ9C0D4 1074 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 EBF3Q9H4W6 596 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 HPS4Q9NQG7 708 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 ZMYM5Q9UJ78 669 aa15.24■□□□□ 0.03
RAB28-205ENST00000508274 MYH10P35580 1976 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 A8MXQ7 604 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 ZNF202O95125 648 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 ARSAP15289 507 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 PTPN1P18031 435 aaKnown RBP15.23■□□□□ 0.03
RAB28-205ENST00000508274 ITPRIPL2Q3MIP1 535 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 C1orf220Q5T0J3 134 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 RALGPS2Q86X27 583 aaPredicted RBP15.23■□□□□ 0.03
RAB28-205ENST00000508274 ARL14EPQ8N8R7 260 aaPredicted RBP15.23■□□□□ 0.03
RAB28-205ENST00000508274 B3GALNT2Q8NCR0 500 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 TMEM174Q8WUU8 243 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 CHFRQ96EP1 664 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 SPATA17Q96L03 361 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 SDCBP2Q9H190 292 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 SEMA4AQ9H3S1 761 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 VRTNQ9H8Y1 702 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 KIF9Q9HAQ2 790 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 THG1LQ9NWX6 298 aaKnown RBP15.23■□□□□ 0.03
RAB28-205ENST00000508274 TRAF3IP3Q9Y228 551 aa15.23■□□□□ 0.03
RAB28-205ENST00000508274 KINO60870 393 aaKnown RBP15.22■□□□□ 0.03
RAB28-205ENST00000508274 CKMP06732 381 aa15.22■□□□□ 0.03
RAB28-205ENST00000508274 ANXA13P27216 316 aa15.22■□□□□ 0.03
RAB28-205ENST00000508274 ZNF268Q14587 947 aaPredicted RBP15.22■□□□□ 0.03
RAB28-205ENST00000508274 ZACNQ401N2 412 aa15.22■□□□□ 0.03
RAB28-205ENST00000508274 ZNF667Q5HYK9 610 aa15.22■□□□□ 0.03
RAB28-205ENST00000508274 DENND5BQ6ZUT9 1274 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms