RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 SFR1Q86XK3 245 aa19.29■□□□□ 0.68
CLDND1-217ENST00000508071 SCN4BQ8IWT1 228 aa19.29■□□□□ 0.68
CLDND1-217ENST00000508071 C1orf127Q8N9H9 656 aa19.29■□□□□ 0.68
CLDND1-217ENST00000508071 USP33Q8TEY7 942 aa19.29■□□□□ 0.68
CLDND1-217ENST00000508071 PKMYT1Q99640 499 aa19.29■□□□□ 0.68
CLDND1-217ENST00000508071 GCNT4Q9P109 453 aa19.29■□□□□ 0.68
CLDND1-217ENST00000508071 ZMIZ1Q9ULJ6 1067 aa19.29■□□□□ 0.68
CLDND1-217ENST00000508071 EXOC7Q9UPT5 735 aa19.29■□□□□ 0.68
CLDND1-217ENST00000508071 ASPMQ8IZT6 3477 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 ZFYVE26Q68DK2 2539 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 C2orf78A6NCI8 922 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 CEACAM1P13688 526 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 HDCP19113 662 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 GJB2P29033 226 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 PCSK1P29120 753 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 DDIT3P35638 169 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 LHX1P48742 406 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 PDE6CP51160 858 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 ANO7Q6IWH7 933 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 CSGALNACT2Q8N6G5 542 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 LRRC52Q8N7C0 313 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 SPATA18Q8TC71 538 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 FUBP3Q96I24 572 aaKnown RBP eCLIP19.28■□□□□ 0.68
CLDND1-217ENST00000508071 CNOT6LQ96LI5 555 aaKnown RBP19.28■□□□□ 0.68
CLDND1-217ENST00000508071 LINC00597Q9H2U6 94 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 ARHGAP26Q9UNA1 814 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 SNX9Q9Y5X1 595 aa19.28■□□□□ 0.68
CLDND1-217ENST00000508071 KRT19P08727 400 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 TCF3P15923 654 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 CSRP1P21291 193 aaKnown RBP19.27■□□□□ 0.68
CLDND1-217ENST00000508071 BCKDHBP21953 392 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 DHPSP49366 369 aaPredicted RBP19.27■□□□□ 0.68
CLDND1-217ENST00000508071 WNT7BP56706 349 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 GRIN1Q05586 938 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 DYMQ7RTS9 669 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 OSTM1Q86WC4 334 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 RASSF3Q86WH2 238 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 TTC30AQ86WT1 665 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 BRSK2Q8IWQ3 736 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 ADGRF2Q8IZF7 708 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 TOP6BLQ8N6T0 577 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 KDF1Q8NAX2 398 aaPredicted RBP19.27■□□□□ 0.68
CLDND1-217ENST00000508071 SAAL1Q96ER3 474 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 ACCSQ96QU6 501 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 MRPL44Q9H9J2 332 aaKnown RBP19.27■□□□□ 0.68
CLDND1-217ENST00000508071 GDAP2Q9NXN4 497 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 RBAKQ9NYW8 714 aaPredicted RBP19.27■□□□□ 0.68
CLDND1-217ENST00000508071 ITGA11Q9UKX5 1188 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 MMP17Q9ULZ9 603 aa19.27■□□□□ 0.68
CLDND1-217ENST00000508071 AKAP13Q12802 2813 aa19.27■□□□□ 0.67
CLDND1-217ENST00000508071 ASCC3Q8N3C0 2202 aaKnown RBP19.27■□□□□ 0.67
CLDND1-217ENST00000508071 PATE3B3GLJ2 98 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 K7EQS6 105 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 PPP1R37O75864 691 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 ALDH1A2O94788 518 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 LDHAP00338 332 aaKnown RBP19.26■□□□□ 0.67
CLDND1-217ENST00000508071 SPINK2P20155 84 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 OPRD1P41143 372 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 MAGEA11P43364 429 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 RBP5P82980 135 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 CCDC142Q17RM4 750 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 UAP1L1Q3KQV9 507 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 C4orf50Q6ZRC1 276 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 CCDC33Q8N5R6 958 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 PIGKQ92643 395 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 ADAM33Q9BZ11 813 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 SEL1LQ9UBV2 794 aa19.26■□□□□ 0.67
CLDND1-217ENST00000508071 R3HCC1Q9Y3T6 440 aaKnown RBP19.26■□□□□ 0.67
CLDND1-217ENST00000508071 PTPRDP23468 1912 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 GON4LQ3T8J9 2241 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 CDX4O14627 284 aaPredicted RBP19.25■□□□□ 0.67
CLDND1-217ENST00000508071 HCRTO43612 131 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 IRX4P78413 519 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 KCNA1Q09470 495 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 CRY1Q16526 586 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 L1TD1Q5T7N2 865 aaKnown RBP19.25■□□□□ 0.67
CLDND1-217ENST00000508071 ZSWIM2Q8NEG5 633 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 MDGA1Q8NFP4 955 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 NOC3LQ8WTT2 800 aaKnown RBP19.25■□□□□ 0.67
CLDND1-217ENST00000508071 STRA6Q9BX79 667 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 TRPM5Q9NZQ8 1165 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 TBC1D7Q9P0N9 293 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 MAGEC2Q9UBF1 373 aaPredicted RBP19.25■□□□□ 0.67
CLDND1-217ENST00000508071 WASF3Q9UPY6 502 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 SPEGQ15772 3267 aa19.25■□□□□ 0.67
CLDND1-217ENST00000508071 PI4KAP42356 2102 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 TMEM8BA6NDV4 472 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 MYMKA6NI61 221 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 LEFTY2O00292 366 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 GABRDO14764 452 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 GAP43P17677 238 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 PFKLP17858 780 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 MRPS21P82921 87 aaKnown RBP19.24■□□□□ 0.67
CLDND1-217ENST00000508071 LMAN2Q12907 356 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 FAM171BQ6P995 826 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 SYCP3Q8IZU3 236 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 CXorf38Q8TB03 319 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 SPATA17Q96L03 361 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 SYT15Q9BQS2 421 aa19.24■□□□□ 0.67
CLDND1-217ENST00000508071 CIZ1Q9ULV3 898 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms