RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 XXYLT1Q8NBI6 393 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 MYLPFQ96A32 169 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 CHFRQ96EP1 664 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 FNBP1Q96RU3 617 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 MAGEF1Q9HAY2 307 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 SLC39A2Q9NP94 309 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 GMEB2Q9UKD1 530 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 TRAV19A0A0A6YYK7 116 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 TRDMT1O14717 391 aaKnown RBP16.95■□□□□ 0.3
SSBP2-207ENST00000507472 F13A1P00488 732 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 USP17L7P0C7H9 530 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 PDIA4P13667 645 aaKnown RBP16.95■□□□□ 0.3
SSBP2-207ENST00000507472 GNL1P36915 607 aaPredicted RBP16.95■□□□□ 0.3
SSBP2-207ENST00000507472 AFMP43652 599 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 SNRPFP62306 86 aaKnown RBP16.95■□□□□ 0.3
SSBP2-207ENST00000507472 CYP27A1Q02318 531 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 FAM160A1Q05DH4 1040 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 CYP24A1Q07973 514 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 GRSF1Q12849 480 aaKnown RBP eCLIP16.95■□□□□ 0.3
SSBP2-207ENST00000507472 CUL4BQ13620 913 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 PKP1Q13835 747 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 SIM2Q14190 667 aaPredicted RBP16.95■□□□□ 0.3
SSBP2-207ENST00000507472 PDGFRLQ15198 375 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 MAPRE1Q15691 268 aaKnown RBP16.95■□□□□ 0.3
SSBP2-207ENST00000507472 TMEM196Q5HYL7 178 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 FSTL4Q6MZW2 842 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 PKN3Q6P5Z2 889 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 VSTM1Q6UX27 236 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 HS2ST1Q7LGA3 356 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 LONP2Q86WA8 852 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 HSCBQ8IWL3 235 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 TTC16Q8NEE8 873 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 ZNF516Q92618 1163 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 CGRRF1Q99675 332 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 MRPL45Q9BRJ2 306 aaKnown RBP16.95■□□□□ 0.3
SSBP2-207ENST00000507472 FBRSL1Q9HCM7 1045 aaKnown RBP16.95■□□□□ 0.3
SSBP2-207ENST00000507472 PARD6AQ9NPB6 346 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 FAM13BQ9NYF5 915 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 USP18Q9UMW8 372 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 NME7Q9Y5B8 376 aa16.95■□□□□ 0.3
SSBP2-207ENST00000507472 ATG2BQ96BY7 2078 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 PVALEFA0A1B0GWK0 134 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 C2orf78A6NCI8 922 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 CKMP06732 381 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 HDCP19113 662 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 HOXA6P31267 233 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 CNR2P34972 360 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 GRIK1P39086 918 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 GALK1P51570 392 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 AMPD2Q01433 879 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 SPEM2Q0P670 501 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 MTF1Q14872 753 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 WDR72Q3MJ13 1102 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 RESP18Q5W5W9 173 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 LAIR1Q6GTX8 287 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 ARL14EPQ8N8R7 260 aaPredicted RBP16.94■□□□□ 0.3
SSBP2-207ENST00000507472 FSIP1Q8NA03 581 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 OR6B3Q8NGW1 331 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 PCED1BQ96HM7 432 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 SPATA17Q96L03 361 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
SSBP2-207ENST00000507472 SNX25Q9H3E2 840 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 GCNT4Q9P109 453 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 DENND4CQ5VZ89 1909 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 UBE4BO95155 1302 aa16.94■□□□□ 0.3
SSBP2-207ENST00000507472 ZNF638Q14966 1978 aaKnown RBP16.93■□□□□ 0.3
SSBP2-207ENST00000507472 MED19A0JLT2 244 aaPredicted RBP16.93■□□□□ 0.3
SSBP2-207ENST00000507472 TACC1O75410 805 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 RETP07949 1114 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 GJA4P35212 333 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 USP46P62068 366 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 LMNB2Q03252 620 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 DNM1Q05193 864 aaKnown RBP16.93■□□□□ 0.3
SSBP2-207ENST00000507472 ZNF77Q15935 545 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 KNOP1Q1ED39 458 aaKnown RBP16.93■□□□□ 0.3
SSBP2-207ENST00000507472 BMT2Q1RMZ1 405 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 MDH1BQ5I0G3 518 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 NAIF1Q69YI7 327 aaPredicted RBP16.93■□□□□ 0.3
SSBP2-207ENST00000507472 ATL3Q6DD88 541 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 DENND5BQ6ZUT9 1274 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 C12orf56Q8IXR9 622 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 GRAMD1CQ8IYS0 662 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 SPRYD3Q8NCJ5 442 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 MYCBPAPQ8TBZ2 947 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 ECT2Q9H8V3 914 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 DUS2Q9NX74 493 aaKnown RBP16.93■□□□□ 0.3
SSBP2-207ENST00000507472 RCOR1Q9UKL0 485 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 CFAP45Q9UL16 551 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 WNT6Q9Y6F9 365 aa16.93■□□□□ 0.3
SSBP2-207ENST00000507472 TPRP12270 2363 aaKnown RBP16.92■□□□□ 0.3
SSBP2-207ENST00000507472 PRR5-ARHGAP8B1AHC4 643 aa16.92■□□□□ 0.3
SSBP2-207ENST00000507472 EXOC3O60645 756 aa16.92■□□□□ 0.3
SSBP2-207ENST00000507472 EGFP01133 1207 aa16.92■□□□□ 0.3
SSBP2-207ENST00000507472 FAM163BP0C2L3 166 aa16.92■□□□□ 0.3
SSBP2-207ENST00000507472 PTPN1P18031 435 aaKnown RBP16.92■□□□□ 0.3
SSBP2-207ENST00000507472 ANXA13P27216 316 aa16.92■□□□□ 0.3
SSBP2-207ENST00000507472 MYL6P60660 151 aa16.92■□□□□ 0.3
SSBP2-207ENST00000507472 TNNC1P63316 161 aa16.92■□□□□ 0.3
SSBP2-207ENST00000507472 ARHGAP8P85298 464 aa16.92■□□□□ 0.3
SSBP2-207ENST00000507472 TRPC3Q13507 836 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms