RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 SH3KBP1Q96B97 665 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 CFAP36Q96G28 342 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 CARD6Q9BX69 1037 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 SMYD3Q9H7B4 428 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 NDRG2Q9UN36 371 aaKnown RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 EFCAB8A8MWE9 144 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 TIMP1P01033 207 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 USP17L7P0C7H9 530 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 PNMA6AP0CW24 399 aaPredicted RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 KREMEN2Q8NCW0 462 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 PDZD7Q9H5P4 517 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 AGPAT5Q9NUQ2 364 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 TUBGCP4Q9UGJ1 667 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 MIF4GDA9UHW6 222 aaKnown RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 CBX4O00257 560 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 GSTA1P08263 222 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 GSTA2P09210 222 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 OR4Q2P0C623 313 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 CDC25BP30305 580 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 AKT1P31749 480 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 ROR1Q01973 937 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 TRIM65Q6PJ69 517 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 FAM228AQ86W67 206 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 SLC35F6Q8N357 371 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 NUDCD1Q96RS6 583 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 EDEM3Q9BZQ6 932 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 CASZ1Q86V15 1759 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 ZNF862O60290 1169 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 PALMO75781 387 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 BBS9Q3SYG4 887 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 DDX42Q86XP3 938 aaKnown RBP eCLIP9.88□□□□□ -0.83
NEK1-203ENST00000507142 MCUQ8NE86 351 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 DIS3LQ8TF46 1054 aaKnown RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 R3HDMLQ9H3Y0 253 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 DHX33Q9H6R0 707 aaKnown RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 ZNF263O14978 683 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 IQCF3P0C7M6 154 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 ST3GAL1Q11201 340 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 PRSS55Q6UWB4 352 aaPredicted RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 AUTS2Q8WXX7 1259 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 PBKQ96KB5 322 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 TLR9Q9NR96 1032 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 FLRT1Q9NZU1 646 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 MRPS17Q9Y2R5 130 aaKnown RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 CACNA1FO60840 1977 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 FOXN3O00409 490 aaPredicted RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 POLR2EP19388 210 aaKnown RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 CLCNKBP51801 687 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 PRAMEP78395 509 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 ZBTB16Q05516 673 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 MBTD1Q05BQ5 628 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 TARBP2Q15633 366 aaKnown RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 C16orf59Q7L2K0 433 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 PDCL2Q8N4E4 241 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 OR6P1Q8NGX9 317 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 CCHCR1Q8TD31 782 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 CALR3Q96L12 384 aaKnown RBP9.88□□□□□ -0.83
NEK1-203ENST00000507142 TSPAN18Q96SJ8 248 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 MARCH2Q9P0N8 246 aa9.88□□□□□ -0.83
NEK1-203ENST00000507142 CHD4Q14839 1912 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 PTPN2P17706 415 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 CCR1P32246 355 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 ARL2P36404 184 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 PCSK7Q16549 785 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 C9orf57Q5W0N0 161 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 SERPINB11Q96P15 392 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 JRKLQ9Y4A0 524 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 F8VP50 259 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 PER2O15055 1255 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 ATMINO43313 823 aaPredicted RBP9.87□□□□□ -0.83
NEK1-203ENST00000507142 DNAJC6O75061 913 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 ATP5BP06576 529 aaKnown RBP9.87□□□□□ -0.83
NEK1-203ENST00000507142 C8AP07357 584 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 PON1P27169 355 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 NCKAP1LP55160 1127 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 UBXN2BQ14CS0 331 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 IQCB1Q15051 598 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 LGI2Q8N0V4 545 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 KIAA0895Q8NCT3 520 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 UHMK1Q8TAS1 419 aaKnown RBP9.87□□□□□ -0.83
NEK1-203ENST00000507142 BCAS3Q9H6U6 928 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 TSR3Q9UJK0 312 aaKnown RBP9.87□□□□□ -0.83
NEK1-203ENST00000507142 DNMT3LQ9UJW3 386 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 COL2A1P02458 1487 aaPredicted RBP9.87□□□□□ -0.83
NEK1-203ENST00000507142 NUP188Q5SRE5 1749 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 ATAD1Q8NBU5 361 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 FLCNQ8NFG4 579 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 RFFLQ8WZ73 363 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 SAMD11Q96NU1 681 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 NDFIP2Q9NV92 336 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 RSPH14Q9UHP6 348 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 E5RI56 91 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 BAIAP3O94812 1187 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 FGGP02679 453 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 KLK7P49862 253 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 RHOAP61586 193 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 MAP3K10Q02779 954 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 ZNF211Q13398 564 aaPredicted RBP9.87□□□□□ -0.83
NEK1-203ENST00000507142 SMTNL2Q2TAL5 461 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms