RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ZSCAN5DPP0CG00 497 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 IVDP26440 423 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 TKTP29401 623 aaKnown RBP12.85□□□□□ -0.35
LIN54-206ENST00000506560 FNTAP49354 379 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 PKDCCQ504Y2 493 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 ALS2CLQ60I27 953 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 SPOCD1Q6ZMY3 1216 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 MCRS1Q96EZ8 462 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 GAD1Q99259 594 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 ADAM33Q9BZ11 813 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 TRMT13Q9NUP7 481 aaKnown RBP12.85□□□□□ -0.35
LIN54-206ENST00000506560 DNPEPQ9ULA0 475 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 STRIP2Q9ULQ0 834 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 DERAQ9Y315 318 aa12.85□□□□□ -0.35
LIN54-206ENST00000506560 LAMA2P24043 3122 aaKnown RBP12.84□□□□□ -0.35
LIN54-206ENST00000506560 RPS6KA5O75582 802 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 AXLP30530 894 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 PIGHQ14442 188 aaPredicted RBP12.84□□□□□ -0.35
LIN54-206ENST00000506560 XKR4Q5GH76 650 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 NDRG1Q92597 394 aaKnown RBP12.84□□□□□ -0.35
LIN54-206ENST00000506560 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 RUFY1Q96T51 708 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 PLVAPQ9BX97 442 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 MIS12Q9H081 205 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 CENPHQ9H3R5 247 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 SEMA4AQ9H3S1 761 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 GOLGA6CA6NDK9 693 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 GOLGA6DP0CG33 693 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 GHRP10912 638 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 GNAT1P11488 350 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 MIPP30301 263 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 CHKAP35790 457 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 CDKN2BP42772 138 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 GABRB2P47870 512 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 ATP11AP98196 1134 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 ZNF844Q08AG5 666 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 PPP2R5EQ16537 467 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 TAF2Q6P1X5 1199 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 LRRC52Q8N7C0 313 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 NIPA2Q8N8Q9 360 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 EIF1ADQ8N9N8 165 aaKnown RBP12.84□□□□□ -0.35
LIN54-206ENST00000506560 C3orf58Q8NDZ4 430 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■■■□ 22.1
LIN54-206ENST00000506560 MAGEB5Q9BZ81 275 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 AAASQ9NRG9 546 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 GOLGA6AQ9NYA3 693 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 ASIC3Q9UHC3 531 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 RASAL2Q9UJF2 1139 aa12.84□□□□□ -0.35
LIN54-206ENST00000506560 TIMM13Q9Y5L4 95 aaPredicted RBP12.84□□□□□ -0.35
LIN54-206ENST00000506560 hCG_1818297A0A087WSY0 165 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 PAPSS1O43252 624 aaPredicted RBP12.83□□□□□ -0.36
LIN54-206ENST00000506560 KCNE1P15382 129 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 CD52P31358 61 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 THPOP40225 353 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 ATXN1P54253 815 aaKnown RBP12.83□□□□□ -0.36
LIN54-206ENST00000506560 NRLP54845 237 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 LILRA4P59901 499 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 MMRN1Q13201 1228 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 ZNF268Q14587 947 aaPredicted RBP12.83□□□□□ -0.36
LIN54-206ENST00000506560 CLUL1Q15846 466 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 PPP1R2P3Q6NXS1 205 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 CYP4V2Q6ZWL3 525 aaPredicted RBP12.83□□□□□ -0.36
LIN54-206ENST00000506560 SERINC5Q86VE9 423 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 CCDC25Q86WR0 208 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 NME8Q8N427 588 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 RNF169Q8NCN4 708 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 RXFP2Q8WXD0 754 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 HSPH1Q92598 858 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 FAXDC2Q96IV6 333 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 SENP6Q9GZR1 1112 aaPredicted RBP12.83□□□□□ -0.36
LIN54-206ENST00000506560 UPF3AQ9H1J1 476 aaKnown RBP12.83□□□□□ -0.36
LIN54-206ENST00000506560 GPATCH2LQ9NWQ4 482 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 NEU2Q9Y3R4 380 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 TRPV2Q9Y5S1 764 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 DCDC2CA8MYV0 355 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 CLDN5O00501 218 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 PPFIA2O75334 1257 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 TRPA1O75762 1119 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 KIAA0319Q5VV43 1072 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 SLC35F5Q8WV83 523 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 FAM105AQ9NUU6 356 aa12.83□□□□□ -0.36
LIN54-206ENST00000506560 PODXLO00592 558 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 GNL1P36915 607 aaPredicted RBP12.82□□□□□ -0.36
LIN54-206ENST00000506560 ATP1A2P50993 1020 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 DRG2P55039 364 aaKnown RBP12.82□□□□□ -0.36
LIN54-206ENST00000506560 PAN2Q504Q3 1202 aaKnown RBP12.82□□□□□ -0.36
LIN54-206ENST00000506560 WSCD1Q658N2 575 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 CCSAPQ6IQ19 270 aaPredicted RBP12.82□□□□□ -0.36
LIN54-206ENST00000506560 OLFML1Q6UWY5 402 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 APBB1IPQ7Z5R6 666 aaPredicted RBP12.82□□□□□ -0.36
LIN54-206ENST00000506560 RCOR2Q8IZ40 523 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 CD99L2Q8TCZ2 262 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 SLC2A14Q8TDB8 520 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 LRRN4Q8WUT4 740 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 ART4Q93070 314 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 PPP1R10Q96QC0 940 aaKnown RBP12.82□□□□□ -0.36
LIN54-206ENST00000506560 RABEP2Q9H5N1 569 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 C2CD4BA6NLJ0 364 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 I3L4J1 428 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 BEST1O76090 585 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms