RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 PDE6CP51160 858 aa14.75□□□□□ -0.05
SERF1B-204ENST00000506542 ELAVL2Q12926 359 aaKnown RBP14.75□□□□□ -0.05
SERF1B-204ENST00000506542 LILRA6Q6PI73 481 aa14.75□□□□□ -0.05
SERF1B-204ENST00000506542 TMEM209Q96SK2 561 aa14.75□□□□□ -0.05
SERF1B-204ENST00000506542 POMKQ9H5K3 350 aa14.75□□□□□ -0.05
SERF1B-204ENST00000506542 ACP6Q9NPH0 428 aa14.75□□□□□ -0.05
SERF1B-204ENST00000506542 MTRRQ9UBK8 725 aa14.75□□□□□ -0.05
SERF1B-204ENST00000506542 STK39Q9UEW8 545 aa14.75□□□□□ -0.05
SERF1B-204ENST00000506542 PAXBP1Q9Y5B6 917 aa14.75□□□□□ -0.05
SERF1B-204ENST00000506542 TRAPPC3O43617 180 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 ASPAP45381 313 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 BPIFB4P59827 614 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 RBP5P82980 135 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 ZP2Q05996 745 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 ZNF667Q5HYK9 610 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 ZNF569Q5MCW4 686 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 DSTYKQ6XUX3 929 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 SUSD6Q92537 303 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 FNIP2Q9P278 1114 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 AGAP1Q9UPQ3 857 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 PCDHB4Q9Y5E5 795 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 DUSP10Q9Y6W6 482 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 DENND4AQ7Z401 1863 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 M0QZQ0 153 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 STAU1O95793 577 aaKnown RBP14.74□□□□□ -0.05
SERF1B-204ENST00000506542 SRGAP2BP0DMP2 458 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 CHRNB2P17787 502 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 AARSP49588 968 aaKnown RBP eCLIP14.74□□□□□ -0.05
SERF1B-204ENST00000506542 CBX2Q14781 532 aaPredicted RBP14.74□□□□□ -0.05
SERF1B-204ENST00000506542 TMEM270Q6UE05 265 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 KREMEN2Q8NCW0 462 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 ST13P5Q8NFI4 369 aaPredicted RBP14.74□□□□□ -0.05
SERF1B-204ENST00000506542 DDX1Q92499 740 aaKnown RBP14.74□□□□□ -0.05
SERF1B-204ENST00000506542 RPGRIP1Q96KN7 1286 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 SENP8Q96LD8 212 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 PACSIN1Q9BY11 444 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 BCO2Q9BYV7 579 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 ADAM7Q9H2U9 754 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.74□□□□□ -0.05
SERF1B-204ENST00000506542 SEPT11Q9NVA2 429 aaKnown RBP14.74□□□□□ -0.05
SERF1B-204ENST00000506542 INTUQ9ULD6 942 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 PCDHB8Q9UN66 801 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 SSX2IPQ9Y2D8 614 aa14.74□□□□□ -0.05
SERF1B-204ENST00000506542 R3HCC1Q9Y3T6 440 aaKnown RBP14.74□□□□□ -0.05
SERF1B-204ENST00000506542 CCDC195A0A1B0GUA6 201 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 WDR27A2RRH5 827 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 XPOTO43592 962 aaKnown RBP14.73□□□□□ -0.05
SERF1B-204ENST00000506542 HCRTO43612 131 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 TBC1D4O60343 1298 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 SSTR3P32745 418 aaPredicted RBP14.73□□□□□ -0.05
SERF1B-204ENST00000506542 ZNF132P52740 706 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 YWHAEP62258 255 aaKnown RBP14.73□□□□□ -0.05
SERF1B-204ENST00000506542 FMO1Q01740 532 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 CDR2Q01850 454 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 ROR1Q01973 937 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 MRPL58Q14197 206 aaKnown RBP14.73□□□□□ -0.05
SERF1B-204ENST00000506542 WDR72Q3MJ13 1102 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 CTXN3Q4LDR2 81 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 TAF3Q5VWG9 929 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 ZNF677Q86XU0 584 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 SLC35F6Q8N357 371 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 RBBP8NLQ8NC74 664 aaPredicted RBP14.73□□□□□ -0.05
SERF1B-204ENST00000506542 SECISBP2LQ93073 1101 aaKnown RBP14.73□□□□□ -0.05
SERF1B-204ENST00000506542 ZNF707Q96C28 371 aaPredicted RBP14.73□□□□□ -0.05
SERF1B-204ENST00000506542 HPDLQ96IR7 371 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 NXF1Q9UBU9 619 aaKnown RBP14.73□□□□□ -0.05
SERF1B-204ENST00000506542 POLIQ9UNA4 740 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 MYO10Q9HD67 2058 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 NOTCH4Q99466 2003 aa14.73□□□□□ -0.05
SERF1B-204ENST00000506542 MACROD2A1Z1Q3 448 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 BTNL10A8MVZ5 291 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 MMEP08473 750 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 H2AFZP0C0S5 128 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 GZMAP12544 262 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 CASQ1P31415 396 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 NTHL1P78549 312 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 CCDC142Q17RM4 750 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 ANKS3Q6ZW76 656 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 H2AFVQ71UI9 128 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 SLC7A14Q8TBB6 771 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 PGLYRP2Q96PD5 576 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 PCDHB18PQ96TA0 734 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 SFXN1Q9H9B4 322 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 CISHQ9NSE2 258 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 SALL4Q9UJQ4 1053 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 FBXW11Q9UKB1 542 aa14.72□□□□□ -0.05
SERF1B-204ENST00000506542 CYB561D2O14569 222 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 SYN3O14994 580 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 CCL16O15467 120 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 SEC24AO95486 1093 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 VNN2O95498 520 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 P4HA1P13674 534 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 HOXB8P17481 243 aaPredicted RBP14.71□□□□□ -0.05
SERF1B-204ENST00000506542 MYO1EQ12965 1108 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 RAB33AQ14088 237 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 PUS10Q3MIT2 529 aaKnown RBP14.71□□□□□ -0.05
SERF1B-204ENST00000506542 WSCD1Q658N2 575 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 SCARA5Q6ZMJ2 495 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 RNF19BQ6ZMZ0 732 aa14.71□□□□□ -0.05
SERF1B-204ENST00000506542 ADHFE1Q8IWW8 467 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms