RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 DPEP3Q9H4B8 488 aa15.39■□□□□ 0.05
CDC42SE2-209ENST00000506419 THG1LQ9NWX6 298 aaKnown RBP15.39■□□□□ 0.05
CDC42SE2-209ENST00000506419 GCNT4Q9P109 453 aa15.39■□□□□ 0.05
CDC42SE2-209ENST00000506419 ZMYM5Q9UJ78 669 aa15.39■□□□□ 0.05
CDC42SE2-209ENST00000506419 PCDHGA2Q9Y5H1 932 aa15.39■□□□□ 0.05
CDC42SE2-209ENST00000506419 COL4A2P08572 1712 aa15.39■□□□□ 0.05
CDC42SE2-209ENST00000506419 OTOGLQ3ZCN5 2332 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 LRRIQ3A6PVS8 624 aaPredicted RBP15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 KINO60870 393 aaKnown RBP15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 VNN1O95497 513 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 STAU1O95793 577 aaKnown RBP15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 PRR29P0C7W0 189 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 ARSAP15289 507 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 PTPN1P18031 435 aaKnown RBP15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 CACNA2D1P54289 1103 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 CDH8P55286 799 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 DLG4P78352 724 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 PLCB2Q00722 1185 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 ITPRIPL2Q3MIP1 535 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 TDRD10Q5VZ19 366 aaKnown RBP15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 C4orf50Q6ZRC1 276 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 Q6ZS52 159 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 SLC9A9Q8IVB4 645 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 OR6B3Q8NGW1 331 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 TMEM174Q8WUU8 243 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 MSANTD3Q96H12 275 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 SPATA17Q96L03 361 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 SNX25Q9H3E2 840 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 EBF3Q9H4W6 596 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 FBRSL1Q9HCM7 1045 aaKnown RBP15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 TMEM30AQ9NV96 361 aa15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 NXF1Q9UBU9 619 aaKnown RBP15.38■□□□□ 0.05
CDC42SE2-209ENST00000506419 C2orf78A6NCI8 922 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 GRIK1P39086 918 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 CXCL12P48061 93 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 KRT85P78386 507 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 ZXDBP98169 803 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 CYP27A1Q02318 531 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 DMWDQ09019 674 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 TRPC3Q13507 836 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 RUNX3Q13761 415 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 CCINQ13939 588 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 ZNF268Q14587 947 aaPredicted RBP15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 MDH1BQ5I0G3 518 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 C1orf220Q5T0J3 134 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 VSTM1Q6UX27 236 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 SPEM1Q8N4L4 309 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 ARL14EPQ8N8R7 260 aaPredicted RBP15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 GOLGA5Q8TBA6 731 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 B3GNT5Q9BYG0 378 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 TRPC7Q9HCX4 862 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 EXOC1Q9NV70 894 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 UXTQ9UBK9 157 aaPredicted RBP15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 USP25Q9UHP3 1055 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 DNAH14Q0VDD8 3507 aa15.37■□□□□ 0.05
CDC42SE2-209ENST00000506419 DMXL1Q9Y485 3027 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 CLDN5O00501 218 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 PDXKO00764 312 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 PHACTR2O75167 634 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 RPN1P04843 607 aaKnown RBP15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 ATICP31939 592 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 SYKP43405 635 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 MAPRE1Q15691 268 aaKnown RBP15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 DGKKQ5KSL6 1271 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 NAIF1Q69YI7 327 aaPredicted RBP15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 C1orf228Q6PIY5 440 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 PAQR9Q6ZVX9 377 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 KIAA2013Q8IYS2 634 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 RUBCNQ92622 972 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 C8orf48Q96LL4 319 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 FAM126AQ9BYI3 521 aaPredicted RBP15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 SDCBP2Q9H190 292 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 LINC00597Q9H2U6 94 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 GOLPH3LQ9H4A5 285 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 SMYD3Q9H7B4 428 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 VRTNQ9H8Y1 702 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 TCHHQ07283 1943 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 MIA3Q5JRA6 1907 aa15.36■□□□□ 0.05
CDC42SE2-209ENST00000506419 TICRRQ7Z2Z1 1910 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 A8MXQ7 604 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 F8VP50 259 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 K7ESF4 209 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 NR3C1P04150 777 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 HDCP19113 662 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 GALK1P51570 392 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 CCR3P51677 355 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 TNNC1P63316 161 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 FAM160A1Q05DH4 1040 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 DPYDQ12882 1025 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 NCOA4Q13772 614 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 LRRC32Q14392 662 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 ZNF77Q15935 545 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 FSTL4Q6MZW2 842 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 PKN3Q6P5Z2 889 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 DENND5BQ6ZUT9 1274 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 SYAP1Q96A49 352 aaPredicted RBP15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 IER2Q9BTL4 223 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 TTLL2Q9BWV7 592 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 ZNF518BQ9C0D4 1074 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 RNF38Q9H0F5 515 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms