RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MARVELD2Q8N4S9 558 aa16.62■□□□□ 0.25
SCLT1-208ENST00000506368 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
SCLT1-208ENST00000506368 NLRP4Q96MN2 994 aa16.62■□□□□ 0.25
SCLT1-208ENST00000506368 PRICKLE1Q96MT3 831 aaPredicted RBP16.62■□□□□ 0.25
SCLT1-208ENST00000506368 BCAS3Q9H6U6 928 aa16.62■□□□□ 0.25
SCLT1-208ENST00000506368 DMTF1Q9Y222 760 aa16.62■□□□□ 0.25
SCLT1-208ENST00000506368 PCDHB2Q9Y5E7 798 aa16.62■□□□□ 0.25
SCLT1-208ENST00000506368 DENND3A2RUS2 1198 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 ARHGEF35A5YM69 484 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 DENRO43583 198 aaKnown RBP16.61■□□□□ 0.25
SCLT1-208ENST00000506368 AOC1P19801 751 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 SERPINB8P50452 374 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 PDK3Q15120 406 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 LLGL1Q15334 1064 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 MMEL1Q495T6 779 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 KSR1Q8IVT5 923 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 FBXL13Q8NEE6 735 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 TMC2Q8TDI7 906 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 DDI1Q8WTU0 396 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 UIMC1Q96RL1 719 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 IQCGQ9H095 443 aaKnown RBP16.61■□□□□ 0.25
SCLT1-208ENST00000506368 FAM96AQ9H5X1 160 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 ETNK2Q9NVF9 386 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 RNF181Q9P0P0 153 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 SLC17A7Q9P2U7 560 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 IP6K2Q9UHH9 426 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 PPM1HQ9ULR3 514 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 SNCAIPQ9Y6H5 919 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 IKBKGQ9Y6K9 419 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 CLUHO75153 1309 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 DICER1Q9UPY3 1922 aaKnown RBP16.61■□□□□ 0.25
SCLT1-208ENST00000506368 IGLV3-22A0A075B6J6 115 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 YDJCA8MPS7 323 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 ENO1P06733 434 aaKnown RBP16.61■□□□□ 0.25
SCLT1-208ENST00000506368 GLRA2P23416 452 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 EIF6P56537 245 aaKnown RBP16.61■□□□□ 0.25
SCLT1-208ENST00000506368 CBLBQ13191 982 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 OASLQ15646 514 aaKnown RBP16.61■□□□□ 0.25
SCLT1-208ENST00000506368 C9orf131Q5VYM1 1079 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 C1orf228Q6PIY5 440 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 UGT2A3Q6UWM9 527 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 FBXO11Q86XK2 927 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 ICA1LQ8NDH6 482 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 DIS3LQ8TF46 1054 aaKnown RBP16.61■□□□□ 0.25
SCLT1-208ENST00000506368 CCDC106Q9BWC9 280 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 MRPS26Q9BYN8 205 aaKnown RBP16.61■□□□□ 0.25
SCLT1-208ENST00000506368 LTBP3Q9NS15 1303 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 MKS1Q9NXB0 559 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 PPARGC1AQ9UBK2 798 aaKnown RBP16.61■□□□□ 0.25
SCLT1-208ENST00000506368 DNPEPQ9ULA0 475 aa16.61■□□□□ 0.25
SCLT1-208ENST00000506368 RAB15P59190 212 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 PLCB3Q01970 1234 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 DCTN2Q13561 401 aaKnown RBP16.6■□□□□ 0.25
SCLT1-208ENST00000506368 TTLL12Q14166 644 aaPredicted RBP16.6■□□□□ 0.25
SCLT1-208ENST00000506368 C3orf62Q6ZUJ4 267 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 RAPH1Q70E73 1250 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 MON1BQ7L1V2 547 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 PALM2Q8IXS6 379 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 HSFX1Q9UBD0 423 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 PADI4Q9UM07 663 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 EXOC7Q9UPT5 735 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 EFR3BQ9Y2G0 817 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 SUGT1Q9Y2Z0 365 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 MYPNQ86TC9 1320 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 A6NJR5 290 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 HNRNPRO43390 633 aaKnown RBP16.6■□□□□ 0.25
SCLT1-208ENST00000506368 KLHL2O95198 593 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 ETS2P15036 469 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 BGNP21810 368 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 INHBCP55103 352 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 GTF2BQ00403 316 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 WASHC5Q12768 1159 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 TFDP1Q14186 410 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 ANO5Q75V66 913 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 TTC7BQ86TV6 843 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 SATL1Q86VE3 508 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 CROCCP3Q8IVE0 287 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 CATSPER1Q8NEC5 780 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 PRR11Q96HE9 360 aaPredicted RBP16.6■□□□□ 0.25
SCLT1-208ENST00000506368 EHMT1Q9H9B1 1298 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 CD209Q9NNX6 404 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 DDX56Q9NY93 547 aaKnown RBP16.6■□□□□ 0.25
SCLT1-208ENST00000506368 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
SCLT1-208ENST00000506368 G3BP2Q9UN86 482 aaKnown RBP16.6■□□□□ 0.25
SCLT1-208ENST00000506368 ZNF862O60290 1169 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 YY1P25490 414 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 CCNFP41002 786 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 GRIA2P42262 883 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 SCNN1BP51168 640 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 LGSNQ5TDP6 509 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 PLEKHA7Q6IQ23 1121 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 ZNF554Q86TJ5 538 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 PRPF39Q86UA1 669 aaKnown RBP16.59■□□□□ 0.25
SCLT1-208ENST00000506368 TREML1Q86YW5 311 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 CRLF3Q8IUI8 442 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 PDIK1LQ8N165 341 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 TTC13Q8NBP0 860 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 TTC17Q96AE7 1141 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 SLITRK1Q96PX8 696 aa16.59■□□□□ 0.25
SCLT1-208ENST00000506368 ITGB1BP2Q9UKP3 347 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms