RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 B4GALT5O43286 388 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 RRP9O43818 475 aaKnown RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 MAFO75444 373 aaPredicted RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 AFPP02771 609 aaKnown RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PABPC1P11940 636 aaKnown RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 CPEP16870 476 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 HOXA11P31270 313 aaPredicted RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PSMC5P62195 406 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 OGDHQ02218 1023 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 MBTD1Q05BQ5 628 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 ADCY1Q08828 1119 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PLS1Q14651 629 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 TMEM266Q2M3C6 531 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 CYFIP1Q7L576 1253 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 HAUS6Q7Z4H7 955 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 CEP120Q8N960 986 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 VWCEQ96DN2 955 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 NSUN5Q96P11 429 aaKnown RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 LRRC1Q9BTT6 524 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 THAP2Q9H0W7 228 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PLAC1Q9HBJ0 212 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 MORF4L1Q9UBU8 362 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 TJP2Q9UDY2 1190 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 IGF2BP3O00425 579 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PRODHO43272 600 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 GPR32O75388 356 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 AMHP03971 560 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 NME1P15531 152 aaKnown RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 CXCR5P32302 372 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 ASPAP45381 313 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 AARSP49588 968 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 GNG11P61952 73 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 KLF1Q13351 362 aaPredicted RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 INPP5AQ14642 412 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 CELF3Q5SZQ8 465 aaKnown RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PIK3R6Q5UE93 754 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 SWSAP1Q6NVH7 229 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 ZDHHC24Q6UX98 284 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 ZNF354CQ86Y25 554 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 CMTR2Q8IYT2 770 aaKnown RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 NEK9Q8TD19 979 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 KRT35Q92764 455 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 USP7Q93009 1102 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 IWS1Q96ST2 819 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 NUP58Q9BVL2 599 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 FZD8Q9H461 694 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PCIF1Q9H4Z3 704 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 ZFAND3Q9H8U3 227 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 TBC1D22BQ9NU19 505 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 TTC7AQ9ULT0 858 aaPredicted RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 TRAV20A0A0B4J274 112 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 BTBD19C9JJ37 291 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 TK2O00142 265 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 PALMO75781 387 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 LTFP02788 710 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 RAG1P15918 1043 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 GAP43P17677 238 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 PPP1R2P41236 205 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 C2orf54Q08AI8 447 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 GRB14Q14449 540 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 GNPTABQ3T906 1256 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 RDM1Q8NG50 284 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 TRAPPC12Q8WVT3 735 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 MARVELD3Q96A59 401 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 AARSD1Q9BTE6 412 aaKnown RBP6.31□□□□□ -1.4
SCLT1-207ENST00000506233 STK33Q9BYT3 514 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 ADAMTS10Q9H324 1103 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 TMEM39AQ9NV64 488 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 ANKFY1Q9P2R3 1169 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 GRIN2DO15399 1336 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 TDRD15B5MCY1 1934 aaKnown RBP6.31□□□□□ -1.4
SCLT1-207ENST00000506233 A0A0A6YYK5 440 aaPredicted RBP6.31□□□□□ -1.4
SCLT1-207ENST00000506233 SLC22A31A6NKX4 558 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 GCNT3O95395 438 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 IDEP14735 1019 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 RHCEP18577 417 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 GJA9P57773 515 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 NKX3-2P78367 333 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 RHDQ02161 417 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 ZACNQ401N2 412 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 SPOPLQ6IQ16 392 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 FAM180BQ6P0A1 224 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 CD300LGQ6UXG3 332 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 USP50Q70EL3 339 aaPredicted RBP6.31□□□□□ -1.4
SCLT1-207ENST00000506233 SV2AQ7L0J3 742 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 BNIPLQ7Z465 357 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 ZNF227Q86WZ6 799 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 CCDC65Q8IXS2 484 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 AGGF1Q8N302 714 aaeCLIP6.31□□□□□ -1.4
SCLT1-207ENST00000506233 C1orf162Q8NEQ5 155 aaPredicted RBP6.31□□□□□ -1.4
SCLT1-207ENST00000506233 RABGGTAQ92696 567 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 SAAL1Q96ER3 474 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 JPH1Q9HDC5 661 aaPredicted RBP6.31□□□□□ -1.4
SCLT1-207ENST00000506233 HMGXB4Q9UGU5 601 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 CPSF3Q9UKF6 684 aaKnown RBP6.31□□□□□ -1.4
SCLT1-207ENST00000506233 FAM184BQ9ULE4 1060 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 NUB1Q9Y5A7 615 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 PCDHA10Q9Y5I2 948 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 SCN5AQ14524 2016 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 C9IYK1 514 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms