RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 TRAPPC11Q7Z392 1133 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 LIMS2Q7Z4I7 341 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 MYLPFQ96A32 169 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 CYP2S1Q96SQ9 504 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 UBE4BO95155 1302 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 CLIC2O15247 247 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 TGFB1I1O43294 461 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 PDGFRBP09619 1106 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 CYP27A1Q02318 531 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 SPEM2Q0P670 501 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 SRSF5Q13243 272 aaKnown RBP26.4■■□□□ 1.82
HERC4-212ENST00000505760 MTF1Q14872 753 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 UNC13DQ70J99 1090 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 HS2ST1Q7LGA3 356 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 NELFCDQ8IXH7 590 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 RIN3Q8TB24 985 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 SNX21Q969T3 373 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 CCDC127Q96BQ5 260 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 PARD6AQ9NPB6 346 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 CRTAC1Q9NQ79 661 aa26.4■■□□□ 1.82
HERC4-212ENST00000505760 CDV3Q9UKY7 258 aaKnown RBP26.4■■□□□ 1.82
HERC4-212ENST00000505760 MED19A0JLT2 244 aaPredicted RBP26.39■■□□□ 1.82
HERC4-212ENST00000505760 TRDMT1O14717 391 aaKnown RBP26.39■■□□□ 1.82
HERC4-212ENST00000505760 RETP07949 1114 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 PDIA4P13667 645 aaKnown RBP26.39■■□□□ 1.82
HERC4-212ENST00000505760 TGM1P22735 817 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 WARSP23381 471 aaKnown RBP26.39■■□□□ 1.82
HERC4-212ENST00000505760 BDNFP23560 247 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 HOXA6P31267 233 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 GRIK1P39086 918 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 ME1P48163 572 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 SNRPFP62306 86 aaKnown RBP26.39■■□□□ 1.82
HERC4-212ENST00000505760 FSTL4Q6MZW2 842 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 VSTM1Q6UX27 236 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.39■■□□□ 1.82
HERC4-212ENST00000505760 CPA6Q8N4T0 437 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 XXYLT1Q8NBI6 393 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 SCFD1Q8WVM8 642 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 EXOC4Q96A65 974 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 SLC22A12Q96S37 553 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 SNX25Q9H3E2 840 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 DUS2Q9NX74 493 aaKnown RBP26.39■■□□□ 1.82
HERC4-212ENST00000505760 FAM13BQ9NYF5 915 aa26.39■■□□□ 1.82
HERC4-212ENST00000505760 PTPRDP23468 1912 aa26.39■■□□□ 1.81
HERC4-212ENST00000505760 ATG13O75143 517 aa26.38■■□□□ 1.81
HERC4-212ENST00000505760 ZSCAN22P10073 491 aaPredicted RBP26.38■■□□□ 1.81
HERC4-212ENST00000505760 ANXA13P27216 316 aa26.38■■□□□ 1.81
HERC4-212ENST00000505760 CASP1P29466 404 aa26.38■■□□□ 1.81
HERC4-212ENST00000505760 CYP24A1Q07973 514 aa26.38■■□□□ 1.81
HERC4-212ENST00000505760 KCNB1Q14721 858 aa26.38■■□□□ 1.81
HERC4-212ENST00000505760 CEP68Q76N32 757 aa26.38■■□□□ 1.81
HERC4-212ENST00000505760 HSCBQ8IWL3 235 aa26.38■■□□□ 1.81
HERC4-212ENST00000505760 SPATA17Q96L03 361 aa26.38■■□□□ 1.81
HERC4-212ENST00000505760 CGRRF1Q99675 332 aa26.38■■□□□ 1.81
HERC4-212ENST00000505760 BLZF1Q9H2G9 400 aa26.38■■□□□ 1.81
HERC4-212ENST00000505760 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.37■■□□□ 1.81
HERC4-212ENST00000505760 GNL1P36915 607 aaPredicted RBP26.37■■□□□ 1.81
HERC4-212ENST00000505760 IFNAR2P48551 515 aa26.37■■□□□ 1.81
HERC4-212ENST00000505760 PSMD6Q15008 389 aa26.37■■□□□ 1.81
HERC4-212ENST00000505760 ZNF77Q15935 545 aa26.37■■□□□ 1.81
HERC4-212ENST00000505760 PKN3Q6P5Z2 889 aa26.37■■□□□ 1.81
HERC4-212ENST00000505760 WDR5BQ86VZ2 330 aa26.37■■□□□ 1.81
HERC4-212ENST00000505760 ARL14EPQ8N8R7 260 aaPredicted RBP26.37■■□□□ 1.81
HERC4-212ENST00000505760 MYCBPAPQ8TBZ2 947 aa26.37■■□□□ 1.81
HERC4-212ENST00000505760 OSCP1Q8WVF1 389 aa26.37■■□□□ 1.81
HERC4-212ENST00000505760 ATP2A3Q93084 1043 aa26.37■■□□□ 1.81
HERC4-212ENST00000505760 CHFRQ96EP1 664 aa26.37■■□□□ 1.81
HERC4-212ENST00000505760 CEP295NLQ96MC4 621 aa26.37■■□□□ 1.81
HERC4-212ENST00000505760 HELZP42694 1942 aaKnown RBP26.37■■□□□ 1.81
HERC4-212ENST00000505760 C2orf78A6NCI8 922 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 LRP3O75074 770 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 F13A1P00488 732 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 CST3P01034 146 aaPredicted RBP26.36■■□□□ 1.81
HERC4-212ENST00000505760 EGFP01133 1207 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 HDCP19113 662 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 DRD1P21728 446 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 HOXC13P31276 330 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 GJA4P35212 333 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 AFMP43652 599 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 PDE6CP51160 858 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 TNNC1P63316 161 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 EHHADHQ08426 723 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 WDR72Q3MJ13 1102 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 MDH1BQ5I0G3 518 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 DENND5BQ6ZUT9 1274 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 OR6B3Q8NGW1 331 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 PCED1BQ96HM7 432 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 P2RY13Q9BPV8 354 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 MRPL45Q9BRJ2 306 aaKnown RBP26.36■■□□□ 1.81
HERC4-212ENST00000505760 ECT2Q9H8V3 914 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 SLC39A2Q9NP94 309 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 EHD2Q9NZN4 543 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 CGNQ9P2M7 1197 aaKnown RBP26.36■■□□□ 1.81
HERC4-212ENST00000505760 PCDHA7Q9UN72 937 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 SLC8A2Q9UPR5 921 aa26.36■■□□□ 1.81
HERC4-212ENST00000505760 NCOR2Q9Y618 2525 aa26.35■■□□□ 1.81
HERC4-212ENST00000505760 TRIM66O15016 1216 aa26.35■■□□□ 1.81
HERC4-212ENST00000505760 GALK1P51570 392 aa26.35■■□□□ 1.81
HERC4-212ENST00000505760 ATXN1P54253 815 aaKnown RBP26.35■■□□□ 1.81
HERC4-212ENST00000505760 USP4Q13107 963 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms