RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 PDGFRBP09619 1106 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 BDNFP23560 247 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 GNL1P36915 607 aaPredicted RBP12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 GRIK1P39086 918 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 FNTBP49356 437 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 PSMC1P62191 440 aaKnown RBP12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 TNNC1P63316 161 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 EHHADHQ08426 723 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 TRPC3Q13507 836 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 MTF1Q14872 753 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 CCDC142Q17RM4 750 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 BMT2Q1RMZ1 405 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 RSPO4Q2I0M5 234 aaPredicted RBP12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 TRIM68Q6AZZ1 485 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 C12orf56Q8IXR9 622 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 CPA6Q8N4T0 437 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 MYCBPAPQ8TBZ2 947 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 MYLPFQ96A32 169 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 CCDC127Q96BQ5 260 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 CYP2S1Q96SQ9 504 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 CRTAC1Q9NQ79 661 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 DUS2Q9NX74 493 aaKnown RBP12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 USP18Q9UMW8 372 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 PATJQ8NI35 1801 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 SCN1AP35498 2009 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 CACNA1IQ9P0X4 2223 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 OTOL1A6NHN0 477 aaPredicted RBP12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 TRIM66O15016 1216 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 HRO43593 1189 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 EXOC3O60645 756 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 ARSAP15289 507 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 PFKLP17858 780 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 HDCP19113 662 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 DRD1P21728 446 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 ATICP31939 592 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 AFMP43652 599 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 PPP3CCP48454 512 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 IFNAR2P48551 515 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 DMWDQ09019 674 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 NR1H3Q13133 447 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 KCNB1Q14721 858 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 LPAL2Q16609 132 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 KNOP1Q1ED39 458 aaKnown RBP12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 WDR72Q3MJ13 1102 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 HEATR6Q6AI08 1181 aaKnown RBP12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 DENND5BQ6ZUT9 1274 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 WDR5BQ86VZ2 330 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 OR6B3Q8NGW1 331 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 GOLGA5Q8TBA6 731 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 OSCP1Q8WVF1 389 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 ATP2A3Q93084 1043 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 PCED1BQ96HM7 432 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 SLC39A2Q9NP94 309 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 SLC8A2Q9UPR5 921 aa12.88□□□□□ -0.35
PDLIM7-214ENST00000505746 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 LRP3O75074 770 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 PHACTR2O75167 634 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 STAU1O95793 577 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 SLFN14P0C7P3 912 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 TCF3P15923 654 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 CASP1P29466 404 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 GALK1P51570 392 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 AP3M2P53677 418 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 PSMD2Q13200 908 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 CUL4BQ13620 913 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 ZNF77Q15935 545 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 FBXO43Q4G163 708 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 MDH1BQ5I0G3 518 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 FSTL4Q6MZW2 842 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 CEP68Q76N32 757 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 ARL14EPQ8N8R7 260 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 TTC16Q8NEE8 873 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 RIN3Q8TB24 985 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 SYAP1Q96A49 352 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 C8orf48Q96LL4 319 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 SLC22A12Q96S37 553 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 P2RY13Q9BPV8 354 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 MRPL45Q9BRJ2 306 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 ECT2Q9H8V3 914 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 TRPM5Q9NZQ8 1165 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 RCOR1Q9UKL0 485 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 TICRRQ7Z2Z1 1910 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 ANK1P16157 1881 aa12.87□□□□□ -0.35
PDLIM7-214ENST00000505746 GVINP1Q7Z2Y8 2422 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 CCDC163A0A0D9SF12 145 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 C2orf78A6NCI8 922 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 A8MXQ7 604 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 FOXD2O60548 495 aaPredicted RBP12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 PTPN1P18031 435 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 TGM1P22735 817 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 GJA4P35212 333 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 MYL6P60660 151 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 NOP14P78316 857 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 DNM1Q05193 864 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 SPEM2Q0P670 501 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms