RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 BCCIPQ9P287 314 aaKnown RBP eCLIP10.64□□□□□ -0.71
NEDD9-210ENST00000505589 TBC1D14Q9P2M4 693 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 RALYQ9UKM9 306 aaKnown RBP10.64□□□□□ -0.71
NEDD9-210ENST00000505589 ARHGAP26Q9UNA1 814 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 EXOC7Q9UPT5 735 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 PCDHB9Q9Y5E1 797 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 PCDHB6Q9Y5E3 794 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 K7EQS6 105 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 FAM189A1O60320 539 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 TBCAO75347 108 aaKnown RBP10.63□□□□□ -0.71
NEDD9-210ENST00000505589 ZNF217O75362 1048 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 ENGP17813 658 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 P2RY2P41231 377 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 ACOT2P49753 483 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 SIM1P81133 766 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-210ENST00000505589 SEMA3BQ13214 749 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 LYSMD4Q5XG99 296 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 TTC30AQ86WT1 665 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 CCDC83Q8IWF9 413 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 ADGRG2Q8IZP9 1017 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 PGBD3Q8N328 593 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 LRRC52Q8N7C0 313 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 KRI1Q8N9T8 703 aaKnown RBP10.63□□□□□ -0.71
NEDD9-210ENST00000505589 TTC16Q8NEE8 873 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 OLIG1Q8TAK6 271 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 SH3RF2Q8TEC5 729 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 HVCN1Q96D96 273 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 CYP2S1Q96SQ9 504 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 MMTAG2Q9BU76 263 aaKnown RBP10.63□□□□□ -0.71
NEDD9-210ENST00000505589 TPSD1Q9BZJ3 242 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 ST6GALNAC4Q9H4F1 302 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.63□□□□□ -0.71
NEDD9-210ENST00000505589 DDX43Q9NXZ2 648 aaKnown RBP10.63□□□□□ -0.71
NEDD9-210ENST00000505589 MAGEC2Q9UBF1 373 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-210ENST00000505589 CIZ1Q9ULV3 898 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-210ENST00000505589 STYXL1Q9Y6J8 313 aa10.63□□□□□ -0.71
NEDD9-210ENST00000505589 EIF4E1BA6NMX2 242 aaKnown RBP10.62□□□□□ -0.71
NEDD9-210ENST00000505589 PP2D1A8MPX8 630 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 PPEF2O14830 753 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 ADH1CP00326 375 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 SERPINF2P08697 491 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 SPINK2P20155 84 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 ANXA13P27216 316 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 HOXC13P31276 330 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 GRIA2P42262 883 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 MAGEA11P43364 429 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 TOB1P50616 345 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-210ENST00000505589 ZNF131P52739 623 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 ATP2C1P98194 919 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-210ENST00000505589 MYO1EQ12965 1108 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 USP4Q13107 963 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 DDR2Q16832 855 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 INTS6LQ5JSJ4 861 aaKnown RBP10.62□□□□□ -0.71
NEDD9-210ENST00000505589 BTBD8Q5XKL5 378 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 SDE2Q6IQ49 451 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 KCNK18Q7Z418 384 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 TOP6BLQ8N6T0 577 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 ARL14EPQ8N8R7 260 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-210ENST00000505589 RASSF8Q8NHQ8 419 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 POMGNT1Q8WZA1 660 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 OTUB2Q96DC9 234 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 SPATA17Q96L03 361 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 REEP2Q9BRK0 252 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 LINC00597Q9H2U6 94 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 ZHX3Q9H4I2 956 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 FAM124BQ9H5Z6 455 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-210ENST00000505589 GDAP2Q9NXN4 497 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 SUSD2Q9UGT4 822 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 INVSQ9Y283 1065 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 WNT6Q9Y6F9 365 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 ZNF638Q14966 1978 aaKnown RBP10.62□□□□□ -0.71
NEDD9-210ENST00000505589 ATRXP46100 2492 aa10.62□□□□□ -0.71
NEDD9-210ENST00000505589 ATG2BQ96BY7 2078 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 VWA3AA6NCI4 1184 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 TRIM66O15016 1216 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 HYAL3O43820 417 aaPredicted RBP10.61□□□□□ -0.71
NEDD9-210ENST00000505589 BMP15O95972 392 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 FAM163BP0C2L3 166 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 GNSP15586 552 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 CYP2F1P24903 491 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 DDIT3P35638 169 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 GRIK1P39086 918 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 MAPK8P45983 427 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 RBP5P82980 135 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 NBR1Q14596 966 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 E2F5Q15329 346 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 SURF1Q15526 300 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 IL17AQ16552 155 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 C8orf34Q49A92 452 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 ARSHQ5FYA8 562 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 SYCP2LQ5T4T6 812 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 DENND5BQ6ZUT9 1274 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 PIP4P1Q86T03 277 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 GPBP1Q86WP2 473 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 PROSER1Q86XN7 944 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 SCN4BQ8IWT1 228 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 CSGALNACT2Q8N6G5 542 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 TXNDC5Q8NBS9 432 aaKnown RBP10.61□□□□□ -0.71
NEDD9-210ENST00000505589 MDGA1Q8NFP4 955 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 PNMA5Q96PV4 448 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms