RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 TMEM86AQ8N2M4 240 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 SLC35F6Q8N357 371 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 TMEM35BQ8NCS4 154 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 CPA5Q8WXQ8 436 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 RSPH1Q8WYR4 309 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 ARHGEF26Q96DR7 871 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 CYFIP2Q96F07 1278 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 NOX5Q96PH1 765 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 ALS2CR12Q96Q35 445 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 THAP2Q9H0W7 228 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 IRF2BPLQ9H1B7 796 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 ISCUQ9H1K1 167 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 NSUN3Q9H649 340 aaKnown RBP9.91□□□□□ -0.82
TPM3-218ENST00000505010 NRDE2Q9H7Z3 1164 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 DDX43Q9NXZ2 648 aaKnown RBP9.91□□□□□ -0.82
TPM3-218ENST00000505010 MYO1AQ9UBC5 1043 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 HCSTQ9UBK5 93 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 DNAI1Q9UI46 699 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 KIAA1257Q9ULG3 409 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 PCDHGC3Q9UN70 934 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.91□□□□□ -0.82
TPM3-218ENST00000505010 TIMM13Q9Y5L4 95 aaPredicted RBP9.91□□□□□ -0.82
TPM3-218ENST00000505010 DUSP10Q9Y6W6 482 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 PTPRDP23468 1912 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 PATJQ8NI35 1801 aa9.91□□□□□ -0.82
TPM3-218ENST00000505010 TMEM221A6NGB7 291 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 H3BNC9 293 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 TMEM189-UBE2V1I3L0A0 370 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 M0R296 226 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 O00370 1275 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 CCDC130P13994 396 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 LMO2P25791 158 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 ADORA2BP29275 332 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 NOP2P46087 812 aaKnown RBP9.9□□□□□ -0.82
TPM3-218ENST00000505010 SLC11A1P49279 550 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 BCAR1P56945 870 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 TCF15Q12870 199 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 COL19A1Q14993 1142 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 STILQ15468 1287 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 IFI16Q16666 785 aaKnown RBP9.9□□□□□ -0.82
TPM3-218ENST00000505010 CD300LGQ6UXG3 332 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 MMS22LQ6ZRQ5 1243 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 TRIM67Q6ZTA4 783 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 C12orf29Q8N999 325 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 RFFLQ8WZ73 363 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 TRIM11Q96F44 468 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 TNIP3Q96KP6 325 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 SUSD3Q96L08 255 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 WDR24Q96S15 920 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 LPIN3Q9BQK8 851 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 SYT15Q9BQS2 421 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 C11orf70Q9BRQ4 267 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 TMEM175Q9BSA9 504 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 SALL4Q9UJQ4 1053 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 TSPAN16Q9UKR8 245 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 DSEQ9UL01 958 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 PCDHB8Q9UN66 801 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 CAPN6Q9Y6Q1 641 aa9.9□□□□□ -0.82
TPM3-218ENST00000505010 TECTAO75443 2155 aa9.9□□□□□ -0.83
TPM3-218ENST00000505010 MYO16Q9Y6X6 1858 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 A0A0A6YYK5 440 aaPredicted RBP9.89□□□□□ -0.83
TPM3-218ENST00000505010 BTNL10A8MVZ5 291 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 M0QZQ0 153 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 NRP1O14786 923 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 ATP2C2O75185 946 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 TADA2AO75478 443 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 DGKIO75912 1065 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 TUBB4AP04350 444 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 FAM163BP0C2L3 166 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 MYBL1P10243 752 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 CASQ1P31415 396 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 CDH5P33151 784 aaPredicted RBP9.89□□□□□ -0.83
TPM3-218ENST00000505010 LTBRP36941 435 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 PBX3P40426 434 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 LHX1P48742 406 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 GPC5P78333 572 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 HTRA4P83105 476 aaPredicted RBP9.89□□□□□ -0.83
TPM3-218ENST00000505010 CLUL1Q15846 466 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 CCDC142Q17RM4 750 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 C2CD6Q53TS8 623 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 MDH1BQ5I0G3 518 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 SPOUT1Q5T280 376 aaKnown RBP9.89□□□□□ -0.83
TPM3-218ENST00000505010 PPP1R26Q5T8A7 1209 aaPredicted RBP9.89□□□□□ -0.83
TPM3-218ENST00000505010 LIN9Q5TKA1 542 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 ARHGAP17Q68EM7 881 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 OVOS1Q6IE37 1185 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 LCLAT1Q6UWP7 414 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.89□□□□□ -0.83
TPM3-218ENST00000505010 MON1BQ7L1V2 547 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 PHLDB2Q86SQ0 1253 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 PHF13Q86YI8 300 aaPredicted RBP9.89□□□□□ -0.83
TPM3-218ENST00000505010 MCOLN2Q8IZK6 566 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 RNF10Q8N5U6 811 aaKnown RBP9.89□□□□□ -0.83
TPM3-218ENST00000505010 B3GALNT2Q8NCR0 500 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 MSANTD4Q8NCY6 345 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 UBA3Q8TBC4 463 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 SPATA18Q8TC71 538 aa9.89□□□□□ -0.83
TPM3-218ENST00000505010 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
TPM3-218ENST00000505010 ATOH1Q92858 354 aaPredicted RBP9.89□□□□□ -0.83
TPM3-218ENST00000505010 MED10Q9BTT4 135 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms