RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ARL14EPQ8N8R7 260 aaPredicted RBP7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 SYT2Q8N9I0 419 aaPredicted RBP7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 FBXO18Q8NFZ0 1043 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 USP33Q8TEY7 942 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 REEP2Q9BRK0 252 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 DPP3Q9NY33 737 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 KCNG1Q9UIX4 513 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 CPSF3Q9UKF6 684 aaKnown RBP7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 NEUROG3Q9Y4Z2 214 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 KIAA1549LQ6ZVL6 1849 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 IGF2RP11717 2491 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 SCN1AP35498 2009 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 DENND4CQ5VZ89 1909 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 A0A0B4J269 797 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 TCRBV21S2A2A0A5A6 115 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 VWA3AA6NCI4 1184 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 C2orf78A6NCI8 922 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 KPNA7A9QM74 516 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 K7EQS6 105 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 HCRTO43612 131 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 NOL4O94818 638 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 KLF8O95600 359 aaPredicted RBP7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 NFATC1O95644 943 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 PIGRP01833 764 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 HNRNPLP14866 589 aaKnown RBP eCLIP7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 PAX3P23760 479 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 OPRD1P41143 372 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 P2RY2P41231 377 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 TFAMQ00059 246 aaKnown RBP7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 CRY1Q16526 586 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 NFE2Q16621 373 aaPredicted RBP7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 INTS6LQ5JSJ4 861 aaKnown RBP7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 LYSMD4Q5XG99 296 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 LMBRD2Q68DH5 695 aaPredicted RBP7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 ADALQ6DHV7 355 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 SLC39A4Q6P5W5 647 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 SFTPA1Q8IWL2 248 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 PDCL2Q8N4E4 241 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 CHCHD4Q8N4Q1 142 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 ALLCQ8N6M5 410 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 TXNDC5Q8NBS9 432 aaKnown RBP7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 OR2I1PQ8NGU4 316 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 WHAMMQ8TF30 809 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 HMGB4Q8WW32 186 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 ZNF560Q96MR9 790 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 TSPAN18Q96SJ8 248 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 LINC00597Q9H2U6 94 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 ASB7Q9H672 318 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 TMEM206Q9H813 350 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 TMEM74BQ9NUR3 256 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 SMPD4Q9NXE4 827 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 DDX43Q9NXZ2 648 aaKnown RBP7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 UXTQ9UBK9 157 aaPredicted RBP7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 EVLQ9UI08 416 aaPredicted RBP7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 MMP17Q9ULZ9 603 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 DERAQ9Y315 318 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 MSRB2Q9Y3D2 182 aa7.41□□□□□ -1.22
NPIPB3-203ENST00000504841 ASCC3Q8N3C0 2202 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 ANKRD63C9JTQ0 380 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 SGK1O00141 431 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 LAD1O00515 517 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 TRAK2O60296 914 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 HUS1O60921 280 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 TBCAO75347 108 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 ABL1P00519 1130 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 CYP17A1P05093 508 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 ADRB2P07550 413 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 HDCP19113 662 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 ITPKAP23677 461 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 POLR2BP30876 1174 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 PRPHP41219 470 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 FAM193AP78312 1265 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 HMGN5P82970 282 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 MYL7Q01449 175 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 KDSRQ06136 332 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 ARSHQ5FYA8 562 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 HYIQ5T013 277 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 MCTP1Q6DN14 999 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 FILIP1Q7Z7B0 1213 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 SPATA2LQ8IUW3 424 aaPredicted RBP7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 SYT12Q8IV01 421 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 ADGRF2Q8IZF7 708 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 FSIP1Q8NA03 581 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 RASSF8Q8NHQ8 419 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 CCDC26Q8TAB7 109 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 NOC3LQ8WTT2 800 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 ERLEC1Q96DZ1 483 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 FAM84AQ96KN4 292 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 FNBP1Q96RU3 617 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 LLPHQ9BRT6 129 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 IKZF4Q9H2S9 585 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 PARVGQ9HBI0 331 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 KCND2Q9NZV8 630 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 GCNT4Q9P109 453 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 MBD1Q9UIS9 605 aaPredicted RBP7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 GTF3C4Q9UKN8 822 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 AGO2Q9UKV8 859 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 ODF2LQ9ULJ1 636 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 L1RE1Q9UN81 338 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms